RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 HIGD1AQ9Y241 93 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 A6NDX4 124 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 RPL35P42766 123 aaKnown RBP4.86□□□□□ -1.63
CLK1-210ENST00000473565 ZNF491Q8N8L2 437 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 Q8WTZ3 238 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 RNF125Q96EQ8 232 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 C17orf77Q96MU5 243 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 C19orf24Q9BVV8 132 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 SLC25A39Q9BZJ4 359 aaPredicted RBP4.86□□□□□ -1.63
CLK1-210ENST00000473565 IGHV3OR16-13A0A075B7E8 117 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ELOA3CA0A087WX78 387 aaPredicted RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 IGHV3-74A0A0B4J1X5 117 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 TRAV41A0A0B4J266 112 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 TRAV34A0A0B4J273 112 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 LOC105371267A0A1B0GV96 52 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 F6UZH7 168 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 CTSGP08311 255 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 GP9P14770 177 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 FCGR2BP31994 310 aaPredicted RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 CLEC19AQ6UXS0 136 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 LINC01551Q86U37 167 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 OR1L6Q8NGR2 347 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 OCC1Q8TAD7 63 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 GNB4Q9HAV0 340 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 CLEC3BP05452 202 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 OR5I1Q13606 314 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ELOBQ15370 118 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ZNF600Q6ZNG1 722 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 RNF2Q99496 336 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ASCL2Q99929 193 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 THYN1Q9P016 225 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 IGHV3-49A0A0A0MS15 119 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 IGHV3-66A0A0C4DH42 116 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 PPP5D1E7EU14 171 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 K7EN84 100 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ZNF207O43670 478 aaKnown RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 TOMM40O96008 361 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 NBEAP1P0C6P0 100 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 PNRC1Q12796 327 aaPredicted RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 Q71RC1 249 aaPredicted RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 ZNF329Q86UD4 541 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 EXOC3-AS1Q8N2X6 119 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 C15orf54Q8N8G6 183 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ZNF414Q96IQ9 312 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 CCDC140Q96MF4 163 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 ZNF48Q96MX3 618 aaPredicted RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 KLK15Q9H2R5 256 aa4.85□□□□□ -1.63
CLK1-210ENST00000473565 MRPL27Q9P0M9 148 aaKnown RBP4.85□□□□□ -1.63
CLK1-210ENST00000473565 TRBV12-3P01733 135 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 IGHV3-11P01762 117 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 GATA3P23771 443 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 PLP1P60201 277 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 RPL15P61313 204 aaKnown RBP4.84□□□□□ -1.63
CLK1-210ENST00000473565 CENPWQ5EE01 88 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 C10orf99Q6UWK7 81 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 ZNF586Q9NXT0 402 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 A0A087WWC5 75 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 TRBV9A0A0B4J1U6 114 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 A0A1W2PRE2 83 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 PGPA6NDG6 321 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 HELTA6NFD8 242 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 MT-ND4LP03901 98 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 TRGV3P03979 118 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 RAB5AP20339 215 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 OTOGQ6ZRI0 2925 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 LRRC75A-AS1Q8N1F1 130 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 ZNF502Q8TBZ5 544 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 C11orf52Q96A22 123 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 MLXQ9UH92 298 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 SELENOKQ9Y6D0 94 aa4.84□□□□□ -1.63
CLK1-210ENST00000473565 WI2-2373I1.2A0A1W2PRP0 233 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 H3BRN7 92 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 H7BYZ3 331 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 SLC17A3O00476 420 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 SLC25A5P05141 298 aaKnown RBP4.84□□□□□ -1.64
CLK1-210ENST00000473565 RPS10P46783 165 aaKnown RBP4.84□□□□□ -1.64
CLK1-210ENST00000473565 TPPP2P59282 170 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 IGFL4Q6B9Z1 124 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 SHANK2-AS3Q9BTD1 123 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 TUBA4BQ9H853 241 aa4.84□□□□□ -1.64
CLK1-210ENST00000473565 FLNBO75369 2602 aaKnown RBP4.83□□□□□ -1.64
CLK1-210ENST00000473565 ZNF98A6NK75 572 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 B4DEV8 164 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 CLDN34H7C241 214 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 IGHG2P01859 326 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 FAM3BP58499 235 aaPredicted RBP4.83□□□□□ -1.64
CLK1-210ENST00000473565 YPEL3P61236 119 aaPredicted RBP4.83□□□□□ -1.64
CLK1-210ENST00000473565 C19orf54Q5BKX5 351 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 TOMM20LQ6UXN7 152 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 C1QL4Q86Z23 238 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 OR5B12Q96R08 314 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 TXNDC17Q9BRA2 123 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 Q9H3A6 140 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 NIPBLQ6KC79 2804 aaeCLIP4.83□□□□□ -1.64
CLK1-210ENST00000473565 TRAV30A0A087WSZ9 112 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 A0A1W2PPQ1 181 aa4.83□□□□□ -1.64
CLK1-210ENST00000473565 J3QLI3 93 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms