RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	TSKU	Q8WUA8	353 aa		13.41	□□□□□ -0.26
PCBP4-208	ENST00000471308	MLST8	Q9BVC4	326 aa		13.41	□□□□□ -0.26
PCBP4-208	ENST00000471308	MINOS1-NBL1	R4GNA1	71 aa		13.41	□□□□□ -0.26
PCBP4-208	ENST00000471308	LRBA	P50851	2863 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	NPIPB5	A8MRT5	1133 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	SCGB1D1	O95968	90 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	CA1	P00915	261 aa	Predicted RBP	13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	LTA	P01374	205 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	LEMD1	Q68G75	181 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	S100A7A	Q86SG5	101 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	FAM168A	Q92567	244 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	ZNF492	Q9P255	531 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	NAGK	Q9UJ70	344 aa		13.4	□□□□□ -0.26
PCBP4-208	ENST00000471308	TRAV30	A0A087WSZ9	112 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	BRS3	P32247	399 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	CT83	Q5H943	113 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	ATP5L2	Q7Z4Y8	100 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	VMO1	Q7Z5L0	202 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	GNB4	Q9HAV0	340 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	RPH3AL	Q9UNE2	315 aa		13.4	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZZEF1	O43149	2961 aa		13.39	□□□□□ -0.27
PCBP4-208	ENST00000471308		A8MWP6	167 aa		13.39	□□□□□ -0.27
PCBP4-208	ENST00000471308	APCS	P02743	223 aa		13.39	□□□□□ -0.27
PCBP4-208	ENST00000471308	NUP35	Q8NFH5	326 aa		13.39	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZNF48	Q96MX3	618 aa	Predicted RBP	13.39	□□□□□ -0.27
PCBP4-208	ENST00000471308	SHANK2-AS3	Q9BTD1	123 aa		13.39	□□□□□ -0.27
PCBP4-208	ENST00000471308		H3BRN7	92 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZNF562	Q6V9R5	426 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	BPIFA4P	Q86YQ2	179 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	SAMD10	Q9BYL1	202 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	ARHGAP32	A7KAX9	2087 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308		A6NNC1	897 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	BMPR1B	O00238	502 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	HOXB4	P17483	251 aa	Predicted RBP	13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	ARPC1A	Q92747	370 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	NEU1	Q99519	415 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	NDUFAF3	Q9BU61	184 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	RPP21	Q9H633	154 aa	Known RBP	13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZNF586	Q9NXT0	402 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	DCHS2	Q6V1P9	2916 aa		13.38	□□□□□ -0.27
PCBP4-208	ENST00000471308	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	SRI	P30626	198 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	EBI3	Q14213	229 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	UNQ6494/PRO21346	Q6UXR6	183 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308		Q8N6K4	173 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	OR4F17	Q8NGA8	305 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	RNF125	Q96EQ8	232 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	KCNS1	Q96KK3	526 aa		13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	FAM103A1	Q9BTL3	118 aa	Known RBP	13.37	□□□□□ -0.27
PCBP4-208	ENST00000471308	IGLV11-55	A0A075B6I3	123 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	TRBV6-1	A0A0K0K1D8	114 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	HIGD1C	A8MV81	97 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	BTF3	P20290	206 aa	Known RBP	13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	CD24	P25063	80 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		Q6ZWC4	215 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		Q86TA4	180 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	LYPD1	Q8N2G4	141 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZNF491	Q8N8L2	437 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	PRSS22	Q9GZN4	317 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	SOX21	Q9Y651	276 aa	Predicted RBP	13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		A0A1W2PRD5	423 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		A0A1W2PRF3	423 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		A0A1W2PRM7	423 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		A8MWL6	223 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		F2Z2F3	143 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		H3BTX0	84 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308		P01737	135 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	KIAA1644	Q3SXP7	199 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	TTC9C	Q8N5M4	171 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	SIGLECL1	Q8N7X8	197 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	HSPB9	Q9BQS6	159 aa		13.36	□□□□□ -0.27
PCBP4-208	ENST00000471308	TRBV19	A0A075B6N1	114 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	C19orf71	A6NCJ1	209 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	GNG7	O60262	68 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZNF253	O75346	499 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	CDKN1A	P38936	164 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	MFAP4	P55083	255 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	SGK494	Q96LW2	274 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	GFRA4	Q9GZZ7	299 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	SIRPD	Q9H106	197 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	THYN1	Q9P016	225 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	TBL2	Q9Y4P3	447 aa	Known RBP	13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308		A0A1W2PPR1	153 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	NCBP2L	A6PVI3	153 aa	Known RBP	13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	SCGB2A1	O75556	95 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	IL4	P05112	153 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	IGLC2	P0DOY2	106 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	SLA	Q13239	276 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	IGFBPL1	Q8WX77	278 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	DAZAP1	Q96EP5	407 aa	Known RBP	13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	FANCD2OS	Q96PS1	177 aa		13.35	□□□□□ -0.27
PCBP4-208	ENST00000471308	GPX1	P07203	203 aa		13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	ZFP36	P26651	326 aa	Known RBP	13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	EFNA4	P52798	201 aa		13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	LY6D	Q14210	128 aa		13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	C1orf194	Q5T5A4	169 aa		13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	ASPHD1	Q5U4P2	390 aa		13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	UBTD1	Q9HAC8	227 aa		13.34	□□□□□ -0.27
PCBP4-208	ENST00000471308	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.34	□□□□□ -0.27

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