RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 HECTD1Q9ULT8 2610 aa14.12□□□□□ -0.15
SMC4-211ENST00000469858 WI2-2373I1.2A0A1W2PRP0 233 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 OR2C1O95371 312 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 CLEC3BP05452 202 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 ATP5G2Q06055 141 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 CLEC19AQ6UXS0 136 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 STXBP6Q8NFX7 210 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 FXYD5Q96DB9 178 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 TLN2Q9Y4G6 2542 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 FAM223BA6NKX1 122 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 NDUFB4O95168 129 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 TPPP2P59282 170 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 RHEBQ15382 184 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 USF2Q15853 346 aaPredicted RBP14.11□□□□□ -0.15
SMC4-211ENST00000469858 FAM223AQ8IWN6 122 aa14.11□□□□□ -0.15
SMC4-211ENST00000469858 TRBV7-1A0A0A6YYK4 115 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 IGHV3-35A0A0C4DH35 117 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 GGTLC3B5MD39 225 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 KRTAP1-1Q07627 177 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 TEX29Q8N6K0 151 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 DERL1Q9BUN8 251 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 PRDM13Q9H4Q3 707 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 GNB4Q9HAV0 340 aa14.1□□□□□ -0.15
SMC4-211ENST00000469858 GP9P14770 177 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 SIGLECL1Q8N7X8 197 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 SDF2L1Q9HCN8 221 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 GAR1Q9NY12 217 aaKnown RBP14.09□□□□□ -0.15
SMC4-211ENST00000469858 NAT8Q9UHE5 227 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 AKAP9Q99996 3911 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 A0A1W2PRE2 83 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 H3BRN7 92 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 SRP14P37108 136 aaKnown RBP14.09□□□□□ -0.15
SMC4-211ENST00000469858 BLNKQ8WV28 456 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 SHANK2-AS3Q9BTD1 123 aa14.09□□□□□ -0.15
SMC4-211ENST00000469858 TMA7Q9Y2S6 64 aaKnown RBP14.09□□□□□ -0.15
SMC4-211ENST00000469858 H3BUA1 57 aa14.08□□□□□ -0.16
SMC4-211ENST00000469858 CD5LO43866 347 aa14.08□□□□□ -0.16
SMC4-211ENST00000469858 PF4V1P10720 104 aa14.08□□□□□ -0.16
SMC4-211ENST00000469858 SUMO1P63165 101 aaKnown RBP14.08□□□□□ -0.16
SMC4-211ENST00000469858 PNRC1Q12796 327 aaPredicted RBP14.08□□□□□ -0.16
SMC4-211ENST00000469858 TMEM241Q24JQ0 296 aa14.08□□□□□ -0.16
SMC4-211ENST00000469858 DUX5Q96PT3 197 aa14.08□□□□□ -0.16
SMC4-211ENST00000469858 MXRA5Q9NR99 2828 aa14.08□□□□□ -0.16
SMC4-211ENST00000469858 TGOLN2O43493 480 aa14.07□□□□□ -0.16
SMC4-211ENST00000469858 ZNF600Q6ZNG1 722 aa14.07□□□□□ -0.16
SMC4-211ENST00000469858 YAE1D1Q9NRH1 226 aa14.07□□□□□ -0.16
SMC4-211ENST00000469858 IGHV3OR16-8A0A075B7F1 116 aa14.07□□□□□ -0.16
SMC4-211ENST00000469858 ADIRFQ15847 76 aa14.07□□□□□ -0.16
SMC4-211ENST00000469858 KLK15Q9H2R5 256 aa14.07□□□□□ -0.16
SMC4-211ENST00000469858 H3BTX0 84 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 BRI3O95415 125 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 NBEAP1P0C6P0 100 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 CRYBB3P26998 211 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 CFHR3Q02985 330 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 LCNL1Q6ZST4 164 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 ZNF329Q86UD4 541 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 C11orf52Q96A22 123 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 SMCO4Q9NRQ5 59 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 ZNF580Q9UK33 172 aa14.06□□□□□ -0.16
SMC4-211ENST00000469858 ZNF98A6NK75 572 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 PPP5D1E7EU14 171 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 IGLV1-40P01703 118 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 RANP62826 216 aaKnown RBP14.05□□□□□ -0.16
SMC4-211ENST00000469858 ZNF343Q6P1L6 599 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 S100A7AQ86SG5 101 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 ZNF414Q96IQ9 312 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 PRSS22Q9GZN4 317 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 NPFFR1Q9GZQ6 430 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 TMEM14CQ9P0S9 112 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 SONP18583 2426 aaKnown RBP14.05□□□□□ -0.16
SMC4-211ENST00000469858 TSPAN4O14817 238 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 RPL23P62829 140 aaKnown RBP14.05□□□□□ -0.16
SMC4-211ENST00000469858 TOMM20LQ6UXN7 152 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 USMG5Q96IX5 58 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 ELOVL1Q9BW60 279 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 RABAC1Q9UI14 185 aa14.05□□□□□ -0.16
SMC4-211ENST00000469858 BMPR1BO00238 502 aa14.04□□□□□ -0.16
SMC4-211ENST00000469858 IGHV3-11P01762 117 aa14.04□□□□□ -0.16
SMC4-211ENST00000469858 BPIFA4PQ86YQ2 179 aa14.04□□□□□ -0.16
SMC4-211ENST00000469858 B4DEV8 164 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 ATP6V0BQ99437 205 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 ZFAND3Q9H8U3 227 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 ZNF702PQ9H963 129 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 ACANP16112 2415 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 TRBV20OR9-2A0A075B6H5 130 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 HIST1H1EP10412 219 aaKnown RBP14.03□□□□□ -0.16
SMC4-211ENST00000469858 RPL35P42766 123 aaKnown RBP14.03□□□□□ -0.16
SMC4-211ENST00000469858 RAB9AP51151 201 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 OR4F17Q8NGA8 305 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 ISOC2Q96AB3 205 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 ZNF586Q9NXT0 402 aa14.03□□□□□ -0.16
SMC4-211ENST00000469858 PGPEP1LA6NFU8 196 aa14.02□□□□□ -0.16
SMC4-211ENST00000469858 TRBV12-3P01733 135 aa14.02□□□□□ -0.16
SMC4-211ENST00000469858 ARL3P36405 182 aa14.02□□□□□ -0.16
SMC4-211ENST00000469858 RELQ04864 619 aaPredicted RBP14.02□□□□□ -0.16
SMC4-211ENST00000469858 AURKAIP1Q9NWT8 199 aaPredicted RBP14.02□□□□□ -0.16
SMC4-211ENST00000469858 A0A087WWC5 75 aa14.02□□□□□ -0.17
SMC4-211ENST00000469858 IGHG4P01861 327 aa14.02□□□□□ -0.17
SMC4-211ENST00000469858 C10orf99Q6UWK7 81 aa14.02□□□□□ -0.17
SMC4-211ENST00000469858 C2CD4CQ8TF44 421 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms