RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SLC25A2Q9BXI2 301 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 CALYQ9NYX4 217 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 IGKV1D-17A0A075B6S4 117 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 INS-IGF2F8WCM5 200 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 PEX7O00628 323 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 TOX4O94842 621 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
HDAC3-205ENST00000469550 HOXA4Q00056 320 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-205ENST00000469550 MPV17L2Q567V2 206 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 CT83Q5H943 113 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 CT45A1Q5HYN5 189 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 BVES-AS1Q5T3Y7 98 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 MBNL2Q5VZF2 373 aaKnown RBP7.72□□□□□ -1.17
HDAC3-205ENST00000469550 SLC25A34Q6PIV7 304 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 ZNF329Q86UD4 541 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 CT45A3Q8NHU0 189 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 Q96MF0 132 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 MS4A6AQ9H2W1 248 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 PLSCR4Q9NRQ2 329 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 PROCRQ9UNN8 238 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 DNHD1Q96M86 4753 aa7.72□□□□□ -1.17
HDAC3-205ENST00000469550 HIGD1CA8MV81 97 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 CD5LO43866 347 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 SAA2P0DJI9 122 aaPredicted RBP7.71□□□□□ -1.17
HDAC3-205ENST00000469550 RNASE2P10153 161 aaKnown RBP7.71□□□□□ -1.17
HDAC3-205ENST00000469550 OCIAD2Q56VL3 154 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 PET117Q6UWS5 81 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 Q6ZT83 130 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 Q71RC1 249 aaPredicted RBP7.71□□□□□ -1.17
HDAC3-205ENST00000469550 SPATA12Q7Z6I5 190 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 CIARTQ8N365 385 aaPredicted RBP7.71□□□□□ -1.17
HDAC3-205ENST00000469550 C1orf162Q8NEQ5 155 aaPredicted RBP7.71□□□□□ -1.17
HDAC3-205ENST00000469550 OR1L4Q8NGR5 311 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 PLPPR2Q96GM1 343 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 TMEM191AQ9H0A3 160 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 CST9LQ9H4G1 147 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 UBTD1Q9HAC8 227 aa7.71□□□□□ -1.17
HDAC3-205ENST00000469550 TEX50A0A1B0GTY4 177 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 THBDP07204 575 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 GATA2P23769 480 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-205ENST00000469550 MYCNOSP40205 109 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 HBBP68871 147 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 C17orf58Q2M2W7 97 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 TMEM30BQ3MIR4 351 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 KIR3DL3Q8N743 410 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 OR9G1Q8NH87 305 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 LINC00479Q96M42 142 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 HINT2Q9BX68 163 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 KLF12Q9Y4X4 402 aa7.71□□□□□ -1.18
HDAC3-205ENST00000469550 KBTBD11-OT1A0A1B0GTJ5 212 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 VWC2LB2RUY7 222 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 HSBP1L1C9JCN9 74 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 LYZL6O75951 148 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 NUDT3O95989 172 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 C22orf34Q6ZV56 151 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 SSX8Q7RTT4 187 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 MOB3BQ86TA1 216 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 PRIMA1Q86XR5 153 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 OR2T6Q8NHC8 308 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 PAXXQ9BUH6 204 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 PRSS22Q9GZN4 317 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 GFRA4Q9GZZ7 299 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 SCRT2Q9NQ03 307 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 WASHC3Q9Y3C0 194 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 TRAV5A0A0B4J249 113 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-205ENST00000469550 FAM231BA6NCW3 169 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 LIPFP07098 398 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 MYOD1P15172 320 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 GPR6P46095 362 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-205ENST00000469550 FABP6P51161 128 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 RNF151Q2KHN1 245 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 FAM71F2Q6NXP2 309 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 STXBP6Q8NFX7 210 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 PERPQ96FX8 193 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 LINC00574Q9H8X3 128 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 CLEC5AQ9NY25 188 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 ZNF492Q9P255 531 aa7.7□□□□□ -1.18
HDAC3-205ENST00000469550 IGHV1-24A0A0C4DH33 117 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 A8MWL6 223 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 FSTL3O95633 263 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 IGLV1-44P01699 117 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 CAMPP49913 170 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 BPIFB3P59826 476 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 HIST1H1AQ02539 215 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-205ENST00000469550 MORN5Q5VZ52 161 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 FXYD5Q96DB9 178 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 GPR82Q96P67 336 aa7.69□□□□□ -1.18
HDAC3-205ENST00000469550 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-205ENST00000469550 RPP21Q9H633 154 aaKnown RBP7.69□□□□□ -1.18
HDAC3-205ENST00000469550 SRRM4A7MD48 611 aaKnown RBP7.68□□□□□ -1.18
HDAC3-205ENST00000469550 K7ERU9 68 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 COX7A2P2O60397 106 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 LHBP01229 141 aa7.68□□□□□ -1.18
HDAC3-205ENST00000469550 IGHV3-13P01766 116 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms