RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 EXOC3-AS1Q8N2X6 119 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
SMC4-204ENST00000462787 IFI27P40305 119 aaPredicted RBP12.94□□□□□ -0.34
SMC4-204ENST00000462787 HS3ST6Q96QI5 342 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 TSSC4Q9Y5U2 329 aaPredicted RBP12.94□□□□□ -0.34
SMC4-204ENST00000462787 RNASE2P10153 161 aaKnown RBP12.94□□□□□ -0.34
SMC4-204ENST00000462787 Q86TA4 180 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 SPACA3Q8IXA5 215 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 JMJD8Q96S16 334 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 ARHGEF17Q96PE2 2063 aaPredicted RBP12.94□□□□□ -0.34
SMC4-204ENST00000462787 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 CD177Q8N6Q3 437 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 RTTNQ86VV8 2226 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 IL18BPO95998 194 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 ATP6V0BQ99437 205 aa12.94□□□□□ -0.34
SMC4-204ENST00000462787 SP9P0CG40 484 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 NKX2-8O15522 239 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 SSBP2P81877 361 aaPredicted RBP12.93□□□□□ -0.34
SMC4-204ENST00000462787 RCHY1Q96PM5 261 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 PLXNA4Q9HCM2 1894 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 PMS2P5A8MQ11 134 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
SMC4-204ENST00000462787 LYPD6Q86Y78 171 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 ZNF524Q96C55 264 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 AHCTF1Q8WYP5 2266 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.93□□□□□ -0.34
SMC4-204ENST00000462787 PSMB11A5LHX3 300 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 CEACAM8P31997 349 aaPredicted RBP12.93□□□□□ -0.34
SMC4-204ENST00000462787 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 PGPEP1Q9NXJ5 209 aa12.93□□□□□ -0.34
SMC4-204ENST00000462787 IGHV3OR16-13A0A075B7E8 117 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 IGHV3-74A0A0B4J1X5 117 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 A0A1W2PPM0 123 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 NPIPB5A8MRT5 1133 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 PF4V1P10720 104 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 FAM106AQ4KMX7 169 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 B9A039 149 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 CEACAM4O75871 244 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 LGALS9BQ3B8N2 356 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 ZNF562Q6V9R5 426 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 TMEM133Q9H2Q1 129 aa12.92□□□□□ -0.34
SMC4-204ENST00000462787 PINLYPA6NC86 204 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 NBR2O15453 112 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 C10orf55Q5SWW7 151 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 SDK2Q58EX2 2172 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 NLRC5Q86WI3 1866 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 RNASE8Q8TDE3 154 aaKnown RBP12.91□□□□□ -0.34
SMC4-204ENST00000462787 MDC1Q14676 2089 aaKnown RBP12.91□□□□□ -0.34
SMC4-204ENST00000462787 SIVA1O15304 175 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 FXYD7P58549 80 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 LINC00205P59089 165 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 TRAV2A0A0B4J234 112 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 GGTLC3B5MD39 225 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 PRTN3P24158 256 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 KLF5Q13887 457 aaPredicted RBP12.91□□□□□ -0.34
SMC4-204ENST00000462787 WIPF2Q8TF74 440 aaPredicted RBP12.91□□□□□ -0.34
SMC4-204ENST00000462787 BRWD3Q6RI45 1802 aa12.91□□□□□ -0.34
SMC4-204ENST00000462787 C17orf100A8MU93 164 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 SH2D1AO60880 128 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 PPIFP30405 207 aaKnown RBP12.9□□□□□ -0.34
SMC4-204ENST00000462787 TMPRSS3P57727 454 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 TMEM238C9JI98 176 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 UBE2L6O14933 153 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 TRAV21A0A0B4J279 112 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 MYOD1P15172 320 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 B3GALT5-AS1P59052 145 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 NPFFO15130 113 aa12.9□□□□□ -0.34
SMC4-204ENST00000462787 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.34
SMC4-204ENST00000462787 SVILO95425 2214 aa12.9□□□□□ -0.35
SMC4-204ENST00000462787 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 IGHV3-66A0A0C4DH42 116 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 ZNF71Q9NQZ8 489 aaPredicted RBP12.89□□□□□ -0.35
SMC4-204ENST00000462787 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 IGKV3-15P01624 115 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 CSTL1Q9H114 145 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 HAX1O00165 279 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 WISP1O95388 367 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 DOCK11Q5JSL3 2073 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 NUPR1O60356 82 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 LMO1P25800 156 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
SMC4-204ENST00000462787 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 LHFPL4Q7Z7J7 247 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 DDB2Q92466 427 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 K7EN84 100 aa12.88□□□□□ -0.35
SMC4-204ENST00000462787 ATXN8Q156A1 80 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms