RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 WDR12Q9GZL7 423 aaKnown RBP7.41□□□□□ -1.22
SF3A3-204ENST00000462258 CLEC5AQ9NY25 188 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 PSENENQ9NZ42 101 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 SLC45A2Q9UMX9 530 aa7.41□□□□□ -1.22
SF3A3-204ENST00000462258 RCL1Q9Y2P8 373 aaKnown RBP7.41□□□□□ -1.22
SF3A3-204ENST00000462258 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 SOCS3O14543 225 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 CCSO14618 274 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 DEFB4AO15263 64 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 CCNKO75909 580 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 HLA-DRB4P13762 266 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 GATA2P23769 480 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-204ENST00000462258 PSMB3P49720 205 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 NANOS2P60321 138 aaKnown RBP7.4□□□□□ -1.22
SF3A3-204ENST00000462258 OR8I2Q8N0Y5 310 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 C11orf45Q8TAV5 145 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-204ENST00000462258 SMIM8Q96KF7 97 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 MFFQ9GZY8 342 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 SLC25A32Q9H2D1 315 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 SLC25A22Q9H936 323 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 NUDT15Q9NV35 164 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 KLK5Q9Y337 293 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-204ENST00000462258 HLA-DRB4X5D2U9 266 aa7.4□□□□□ -1.22
SF3A3-204ENST00000462258 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 IGHV4-28A0A0C4DH34 117 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 PMS2P5A8MQ11 134 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF705EA8MWA4 302 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-204ENST00000462258 H3BMM0 161 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TSC22D2O75157 780 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TCRBP04435 133 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 METTL15P1P0C7V9 234 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 MIFP14174 115 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 ORM2P19652 201 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 ID1P41134 155 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 GALR1P47211 349 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 PAX9P55771 341 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 NUTF2P61970 127 aaKnown RBP7.39□□□□□ -1.23
SF3A3-204ENST00000462258 RRAS2P62070 204 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-204ENST00000462258 DLK1P80370 383 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 GDF5OSQ5U4N7 250 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TMEM182Q6ZP80 229 aaPredicted RBP7.39□□□□□ -1.23
SF3A3-204ENST00000462258 CYP2G1PQ6ZSU1 146 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TMEM144Q7Z5S9 345 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 OR1B1Q8NGR6 318 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 LINC00052Q96N35 136 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 SEC22CQ9BRL7 303 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TMEM147Q9BVK8 224 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 C1QTNF4Q9BXJ3 329 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 GSKIPQ9P0R6 139 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 TBC1D24Q9ULP9 559 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 X6R8D5 127 aa7.39□□□□□ -1.23
SF3A3-204ENST00000462258 VPS13DQ5THJ4 4388 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF98A6NK75 572 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 H3BRN7 92 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 ISLRO14498 428 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 IL5P05113 134 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 LINC00869P0C866 280 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 S100A7P31151 101 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 MEOX2P50222 304 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 DEFB1P60022 68 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF846Q147U1 533 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 GSG1LQ6UXU4 331 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 FOXI2Q6ZQN5 318 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 LINC00299Q6ZSB3 139 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 CSNK1G2-AS1Q8NCQ2 148 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 ZNF431Q8TF32 576 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-204ENST00000462258 SCRT1Q9BWW7 348 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 SAV1Q9H4B6 383 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-204ENST00000462258 DOK5Q9P104 306 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 MGAT4CQ9UBM8 478 aa7.38□□□□□ -1.23
SF3A3-204ENST00000462258 FAM25EA8MYX2 175 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 FNDC10F2Z333 226 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 LY6G6CO95867 125 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 IGKV3-20P01619 116 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 MBPP02686 304 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-204ENST00000462258 RBMY1A1P0DJD3 496 aaKnown RBP7.37□□□□□ -1.23
SF3A3-204ENST00000462258 RBMY1CP0DJD4 496 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 TAS2R30P59541 319 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 RAP2BP61225 183 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 SELENOTP62341 195 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 SLC38A11Q08AI6 406 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 RBMY1FQ15415 496 aaKnown RBP7.37□□□□□ -1.23
SF3A3-204ENST00000462258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 OR10P1Q8NGE3 313 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 S100ZQ8WXG8 99 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 C16orf92Q96LL3 132 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 GPR82Q96P67 336 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 HRH4Q9H3N8 390 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 XCL2Q9UBD3 114 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 HIGD1AQ9Y241 93 aa7.37□□□□□ -1.23
SF3A3-204ENST00000462258 KMT2AQ03164 3969 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 FAM240BA0A1B0GVZ2 78 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 C7orf66A4D0T2 115 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 C5orf51A6NDU8 294 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 F6UB75 175 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 L7N2F9 121 aa7.36□□□□□ -1.23
SF3A3-204ENST00000462258 H2AFB2P0C5Z0 115 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms