RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ANKRD34BA5PLL1 514 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 LINC00862A6NCI5 91 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 OR2C1O95371 312 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 ADMP35318 185 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 TECRQ9NZ01 308 aaKnown RBP11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 A0A1B0GV50 99 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 PPP5D1E7EU14 171 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 BMPR1BO00238 502 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 ZNF726P1Q15940 193 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 KHDC1LQ5JSQ8 128 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 IL34Q6ZMJ4 242 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 IQCF2Q8IXL9 164 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 TMEM37Q8WXS4 190 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 OR5B12Q96R08 314 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 MED9Q9NWA0 146 aa11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM39A-203ENST00000461654 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 CXorf1O96002 111 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 LGALS1P09382 135 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 C8orf88P0DMB2 117 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 KHDC3LQ587J8 217 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 WIPF2Q8TF74 440 aaPredicted RBP11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 MARC2Q969Z3 335 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 SEPSECSQ9HD40 501 aaKnown RBP11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 RABAC1Q9UI14 185 aa11.7□□□□□ -0.54
TMEM39A-203ENST00000461654 IGHV3-35A0A0C4DH35 117 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 IFNA1P01562 189 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 STAG3L2P0CL84 134 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 STAG3L3P0CL85 134 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 CDX1P47902 265 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 PPT1P50897 306 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 FGF8P55075 233 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 KIAA0141Q14154 515 aaPredicted RBP11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 PATE2Q6UY27 113 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
TMEM39A-203ENST00000461654 MEGF8Q7Z7M0 2845 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 NDUFA4O00483 81 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 OR7C2O60412 319 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 DEFA6Q01524 100 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 FAM106AQ4KMX7 169 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 SPATA31B1PQ5VZV4 182 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 SSX7Q7RTT5 188 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 NARS2Q96I59 477 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 UHRF2Q96PU4 802 aa11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
TMEM39A-203ENST00000461654 RAB19A4D1S5 217 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 ARL14EPLP0DKL9 152 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 PSMB3P49720 205 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 RPEL1Q2QD12 228 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 METTL26Q96S19 204 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 C20orf24Q9BUV8 137 aa11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 SLC25A39Q9BZJ4 359 aaPredicted RBP11.67□□□□□ -0.54
TMEM39A-203ENST00000461654 ZNF320A2RRD8 509 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 EIF3GO75821 320 aaKnown RBP eCLIP11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 HSPB1P04792 205 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 NPPCP23582 126 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 SLC7A5P1Q8MH63 180 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 DPF1Q92782 380 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 EIF5A2Q9GZV4 153 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 GNG13Q9P2W3 67 aa11.66□□□□□ -0.54
TMEM39A-203ENST00000461654 H3BRN7 92 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 ZP3P21754 424 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 GCHFRP30047 84 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 TAGLN2P37802 199 aaKnown RBP11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 CCL20P78556 96 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 TCTEX1D4Q5JR98 221 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 GPHB5Q86YW7 130 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 KLHL30-AS1Q8NEE0 82 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 OR51M1Q9H341 326 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 TSSC4Q9Y5U2 329 aaPredicted RBP11.65□□□□□ -0.54
TMEM39A-203ENST00000461654 WNK1Q9H4A3 2382 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 CD28P10747 220 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 UBE2L3P68036 154 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 PMS2P11Q13670 270 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 PEA15Q15121 130 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 GUK1Q16774 197 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 HAGHQ16775 308 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 UQCC3Q6UW78 93 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
TMEM39A-203ENST00000461654 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms