RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 NKX2-1P43699 371 aaPredicted RBP8.6□□□□□ -1.03
PDGFB-204ENST00000455790 SPANXN2Q5MJ10 180 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 TMEM182Q6ZP80 229 aaPredicted RBP8.6□□□□□ -1.03
PDGFB-204ENST00000455790 ACOT7LQ6ZUV0 252 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 C17orf77Q96MU5 243 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 LINC00052Q96N35 136 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
PDGFB-204ENST00000455790 C9orf170A2RU37 121 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 SNRPGP15A8MWD9 76 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 F6UB75 175 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 ZNF701M0R085 212 aaPredicted RBP8.59□□□□□ -1.03
PDGFB-204ENST00000455790 NDUFB6O95139 128 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 FABP1P07148 127 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 BTCP35070 178 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 PSMB3P49720 205 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 POLR2GP62487 172 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDGFB-204ENST00000455790 SPANXN5Q5MJ07 72 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 C1orf194Q5T5A4 169 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 ZNF709Q8N972 641 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 PPP1R14BQ96C90 147 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 CIB3Q96Q77 187 aaPredicted RBP8.59□□□□□ -1.03
PDGFB-204ENST00000455790 SCRT1Q9BWW7 348 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 SLC25A32Q9H2D1 315 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 SAV1Q9H4B6 383 aaPredicted RBP8.59□□□□□ -1.03
PDGFB-204ENST00000455790 HECTD4Q9Y4D8 3996 aa8.59□□□□□ -1.03
PDGFB-204ENST00000455790 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 CCNKO75909 580 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 ANXA7P20073 488 aaKnown RBP8.58□□□□□ -1.04
PDGFB-204ENST00000455790 UBE2MP61081 183 aaKnown RBP8.58□□□□□ -1.04
PDGFB-204ENST00000455790 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
PDGFB-204ENST00000455790 AKR1C1Q04828 323 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 C12orf74Q32Q52 190 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
PDGFB-204ENST00000455790 FOXI2Q6ZQN5 318 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 OR8I2Q8N0Y5 310 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 COQ8AQ8NI60 647 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 C1QTNF4Q9BXJ3 329 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 SLC35B3Q9H1N7 401 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 SLC25A22Q9H936 323 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 PFDN2Q9UHV9 154 aa8.58□□□□□ -1.04
PDGFB-204ENST00000455790 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
PDGFB-204ENST00000455790 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
PDGFB-204ENST00000455790 SSSCA1O60232 199 aa8.57□□□□□ -1.04
PDGFB-204ENST00000455790 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
PDGFB-204ENST00000455790 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
PDGFB-204ENST00000455790 ORM2P19652 201 aa8.57□□□□□ -1.04
PDGFB-204ENST00000455790 RPP30P78346 268 aaKnown RBP8.57□□□□□ -1.04
PDGFB-204ENST00000455790 ID3Q02535 119 aa8.57□□□□□ -1.04
PDGFB-204ENST00000455790 OR4B1Q8NGF8 309 aa8.57□□□□□ -1.04
PDGFB-204ENST00000455790 OR4D5Q8NGN0 318 aa8.57□□□□□ -1.04
PDGFB-204ENST00000455790 STRAPQ9Y3F4 350 aaKnown RBP8.57□□□□□ -1.04
PDGFB-204ENST00000455790 IGHV4-4A0A075B6R2 117 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 A0A0J9YX75 114 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 SMCO3A2RU48 225 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 NAP1L6A6NFF2 107 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 ZNF98A6NK75 572 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 PMS2P5A8MQ11 134 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 ISLRO14498 428 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 OR4E1P0C645 316 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 ID1P41134 155 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 INPP1P49441 399 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 FAM78BQ5VT40 261 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 BPIFCQ8NFQ6 507 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 OR1B1Q8NGR6 318 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 DOK5Q9P104 306 aa8.56□□□□□ -1.04
PDGFB-204ENST00000455790 IL7P13232 177 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 GALR1P47211 349 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 EMP1P54849 157 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 PAX9P55771 341 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 TCTAP57738 103 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 C4orf46Q504U0 113 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 IGFL4Q6B9Z1 124 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 TMEM144Q7Z5S9 345 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 RSG1Q9BU20 258 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 PSENENQ9NZ42 101 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 SLC45A2Q9UMX9 530 aa8.55□□□□□ -1.04
PDGFB-204ENST00000455790 DEFB131BA0A096LNP1 70 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 TRAV8-2A0A0B4J237 113 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 H3BRN7 92 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 SCGB1D2O95969 90 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 CFDP00746 253 aaPredicted RBP8.54□□□□□ -1.04
PDGFB-204ENST00000455790 AMBPP02760 352 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 METTL15P1P0C7V9 234 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
PDGFB-204ENST00000455790 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 CYP2G1PQ6ZSU1 146 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 RNF182Q8N6D2 247 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 NEU1Q99519 415 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 RNF126Q9BV68 326 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 TMEM147Q9BVK8 224 aa8.54□□□□□ -1.04
PDGFB-204ENST00000455790 SLC25A39Q9BZJ4 359 aaPredicted RBP8.54□□□□□ -1.04
PDGFB-204ENST00000455790 RCL1Q9Y2P8 373 aaKnown RBP8.54□□□□□ -1.04
PDGFB-204ENST00000455790 A8MTW9 85 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms