RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 C22orf46C9J442 243 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 H3BUT2 72 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 K7EP34 96 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 M0R1B8 84 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 LAMTOR5O43504 91 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 GLRXP35754 106 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 TEX45Q8NA69 505 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 ZC2HC1AQ96GY0 325 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 AHCTF1Q8WYP5 2266 aa10.99□□□□□ -0.65
PTPRE-204ENST00000455661 A0A1W2PNU3 283 aaPredicted RBP10.98□□□□□ -0.65
PTPRE-204ENST00000455661 NCR2O95944 276 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 TNFAIP6P98066 277 aaPredicted RBP10.98□□□□□ -0.65
PTPRE-204ENST00000455661 NHLH1Q02575 133 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 RPRMLQ8N4K4 120 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 C8orf46Q8TAG6 207 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 SRSF12Q8WXF0 261 aaKnown RBP10.98□□□□□ -0.65
PTPRE-204ENST00000455661 PRR14LQ5THK1 2151 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 CELSR3Q9NYQ7 3312 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 FGF6P10767 208 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 HSD52Q0P140 79 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 FOXE3Q13461 319 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 VMA21Q3ZAQ7 101 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
PTPRE-204ENST00000455661 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 A1L4Q6 167 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 ATP1A1-AS1Q5TC04 95 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 TRAV8-1A0A0A6YYK1 113 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 CRYGCP07315 174 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 GOLT1AQ6ZVE7 132 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 UBALD2Q8IYN6 164 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
PTPRE-204ENST00000455661 JKAMPQ9P055 326 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 HIGD1AQ9Y241 93 aa10.97□□□□□ -0.65
PTPRE-204ENST00000455661 A0A1W2PPI3 338 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 SMAD7O15105 426 aaKnown RBP10.96□□□□□ -0.65
PTPRE-204ENST00000455661 SIVA1O15304 175 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 OR4X2Q8NGF9 303 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
PTPRE-204ENST00000455661 PLP1P60201 277 aa10.96□□□□□ -0.66
PTPRE-204ENST00000455661 LPAL2Q16609 132 aa10.96□□□□□ -0.66
PTPRE-204ENST00000455661 HCP5Q6MZN7 132 aa10.96□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM186Q96B77 213 aa10.96□□□□□ -0.66
PTPRE-204ENST00000455661 GUCD1Q96NT3 240 aa10.96□□□□□ -0.66
PTPRE-204ENST00000455661 JMJD8Q96S16 334 aa10.96□□□□□ -0.66
PTPRE-204ENST00000455661 IGLV3-9A0A075B6K5 115 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 TRBV6-1A0A0K0K1D8 114 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 SLC25A17O43808 307 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 CIDEAO60543 219 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 IGLV2-23P01705 113 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 MEF2CQ06413 473 aaPredicted RBP10.95□□□□□ -0.66
PTPRE-204ENST00000455661 Q6AWC8 147 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 HILPDAQ9Y5L2 63 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 RAI1Q7Z5J4 1906 aaPredicted RBP10.95□□□□□ -0.66
PTPRE-204ENST00000455661 IGHV1-46P01743 117 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
PTPRE-204ENST00000455661 NEGR1Q7Z3B1 354 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 ZADH2Q8N4Q0 377 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 THYN1Q9P016 225 aa10.95□□□□□ -0.66
PTPRE-204ENST00000455661 CHTOPQ9Y3Y2 248 aaKnown RBP10.95□□□□□ -0.66
PTPRE-204ENST00000455661 URB1O60287 2271 aaKnown RBP10.94□□□□□ -0.66
PTPRE-204ENST00000455661 DYSFO75923 2080 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 K7EQM0 130 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 IGLV2-11P01706 119 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 APOBEC3AP31941 199 aaPredicted RBP10.94□□□□□ -0.66
PTPRE-204ENST00000455661 RUSC1-AS1Q66K80 236 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM190Q8WZ59 177 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 RAB37Q96AX2 223 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 TMEM14CQ9P0S9 112 aa10.94□□□□□ -0.66
PTPRE-204ENST00000455661 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 SERTM2A0A1B0GWG4 89 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 ZNF883P0CG24 379 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 CCL3L1P16619 93 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 LYZP61626 148 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 TEX36Q5VZQ5 186 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 NAA38Q9BRA0 125 aaKnown RBP10.93□□□□□ -0.66
PTPRE-204ENST00000455661 TPPP3Q9BW30 176 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 SPCS1Q9Y6A9 102 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 OVOL3O00110 214 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 KLK10O43240 276 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
PTPRE-204ENST00000455661 TNFRSF1AP19438 455 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 MC5RP33032 325 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 CACNG7P62955 275 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 TIMM23BQ5SRD1 257 aa10.93□□□□□ -0.66
PTPRE-204ENST00000455661 IGHV3-21A0A0B4J1V1 117 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 SMIM17P0DL12 118 aa10.92□□□□□ -0.66
PTPRE-204ENST00000455661 CEACAM3P40198 252 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms