RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SAA1P0DJI8 122 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 CD24P25063 80 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 PAX9P55771 341 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 SPCS3P61009 180 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 UBE2KP61086 200 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TNFRSF9Q07011 255 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 EBI3Q14213 229 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 PSG5Q15238 335 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 KLF17Q5JT82 389 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 MORN5Q5VZ52 161 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 RUSC1-AS1Q66K80 236 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 CYB5R2Q6BCY4 276 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TMUB2Q71RG4 321 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR1S2Q8NGQ3 325 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TMEM167AQ8TBQ9 72 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 DCUN1D4Q92564 292 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 SMIM8Q96KF7 97 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TSNAXQ99598 290 aaKnown RBP4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TMEM14BQ9NUH8 114 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 BET1LQ9NYM9 111 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 CACFD1Q9UGQ2 172 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 RCL1Q9Y2P8 373 aaKnown RBP4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TNFRSF18Q9Y5U5 241 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 TEP1Q99973 2627 aaKnown RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 A0A0D9SG52 128 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 TEX50A0A1B0GTY4 177 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 C15orf61A6NNL5 157 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 SSSCA1O60232 199 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 RBMXL2O75526 392 aaKnown RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 MED6O75586 246 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 NUDT3O95989 172 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 FSHBP01225 129 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 IGKV1D-33P01593 117 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 IGKV1-33P01594 117 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 PVALBP20472 110 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 CNTFRP26992 372 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 RPL12P30050 165 aaKnown RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 S100A11P31949 105 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 BRS3P32247 399 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 DYNLT3P51808 116 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 MFAP2P55001 183 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 TAS2R30P59541 319 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR2B8PP59922 312 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 HSPE1P61604 102 aaKnown RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR2F1Q13607 317 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 PRSS8Q16651 343 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 MRGPRG-AS1Q2M3A8 158 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 VMA21Q3ZAQ7 101 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 FAM120AOSQ5T036 256 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 RBMS3Q6XE24 437 aaKnown RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 BRD3OSQ6XYD6 125 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 ZNF429Q86V71 674 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 KCNRGQ8N5I3 272 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 Q8N6K4 173 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 NPBQ8NG41 125 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR2T10Q8NGZ9 312 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR5B3Q8NH48 314 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR4A5Q8NH83 315 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 VSTM2AQ8TAG5 236 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 AQP10Q96PS8 301 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 ZNF430Q9H8G1 570 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 PLSCR3Q9NRY6 295 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 FKBP11Q9NYL4 201 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 PRNDQ9UKY0 176 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 ZNF257Q9Y2Q1 563 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 SIGLEC9Q9Y336 463 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR51B2Q9Y5P1 312 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 PUS1Q9Y606 427 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 SOX21Q9Y651 276 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 URGCP-MRPS24S4R325 110 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 V9GYY9 64 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 ZFHX3Q15911 3703 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 F8P00451 2351 aa4.02□□□□□ -1.77
HMGB1P4-201ENST00000455362 TRAV40A0A0B4J280 105 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 IGSF23A1L1A6 192 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 FAM24AA6NFZ4 105 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 CEBPZOSA8MTT3 80 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 SCO1O75880 301 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 IFNA17P01571 189 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 PRSS1P07477 247 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 IAPPP10997 89 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 VDAC2P45880 294 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 CAV2P51636 162 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 KIAA0141Q14154 515 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 FHL2Q14192 279 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 HES1Q14469 280 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 ZNF345Q14585 488 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 C5orf64Q2M2E5 130 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 KIAA1644Q3SXP7 199 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 C5orf47Q569G3 176 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 SPINK9Q5DT21 86 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 MUC21Q5SSG8 566 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 C9orf139Q6ZV77 190 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 PPP1R27Q86WC6 154 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 STPG4Q8N801 248 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR1L8Q8NGR8 309 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 PIFOQ8TCI5 191 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 DTD1Q8TEA8 209 aa4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 CIB3Q96Q77 187 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P4-201ENST00000455362 COMMD5Q9GZQ3 224 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms