RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 NHLRC2Q8NBF2 726 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 LINC01560Q8TB33 94 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 NEU4Q8WWR8 484 aaPredicted RBP9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 VAMP8Q9BV40 100 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 WNT10AQ9GZT5 417 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 RAB1BQ9H0U4 201 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 SPENQ96T58 3664 aaKnown RBP9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 DMXL1Q9Y485 3027 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 TRAV30A0A087WSZ9 112 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 WI2-2373I1.2A0A1W2PRP0 233 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 VWC2LB2RUY7 222 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 LYNX1G3V0Z9 82 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 TIMM23O14925 209 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 EREGO14944 169 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 NBR2O15453 112 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 SPINK4O60575 86 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 LYNX1P0DP58 116 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 PRTN3P24158 256 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 HBBP68871 147 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 SLC35B1P78383 322 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 LDLRAD2Q5SZI1 272 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 S100A7AQ86SG5 101 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 BLNKQ8WV28 456 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 IGFBPL1Q8WX77 278 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 RASL11BQ9BPW5 248 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 CBLN4Q9NTU7 201 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 C1RLQ9NZP8 487 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 RNF114Q9Y508 228 aa9.92□□□□□ -0.82
ECHDC1-209ENST00000454591 NBEAQ8NFP9 2946 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 AKAP13Q12802 2813 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 ZFHX4Q86UP3 3567 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 NPIPB5A8MRT5 1133 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 DIRC3C9JPN6 131 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 MRPS12O15235 138 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 PLXNB1O43157 2135 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 IGLV2-11P01706 119 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 EBI3Q14213 229 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 TMEM75Q8N9X5 138 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 VN1R17PQ8TDU5 208 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
ECHDC1-209ENST00000454591 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 P01737 135 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 C3orf79P0CE67 100 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 IGLC2P0DOY2 106 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 COX7A1P24310 79 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 PDE6HQ13956 83 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 KLK9Q2XQG4 91 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 RBPMS2Q6ZRY4 209 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 BPIFA4PQ86YQ2 179 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 KLK9Q9UKQ9 250 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 ZFP30Q9Y2G7 519 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 ACACAQ13085 2346 aa9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.82
ECHDC1-209ENST00000454591 C20orf202A1L168 122 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 OVOL3O00110 214 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 CD33P20138 364 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 GPR6P46095 362 aaPredicted RBP9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 LYZP61626 148 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 ADORA2A-AS1P86434 159 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 KLRB1Q12918 225 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 DTX2Q86UW9 622 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 Q8N6K4 173 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 ZNF491Q8N8L2 437 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 ONECUT1Q9UBC0 465 aa9.89□□□□□ -0.83
ECHDC1-209ENST00000454591 SERTM2A0A1B0GWG4 89 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 FAM90A27PA6NNH2 459 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 CCL21O00585 134 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 APOHP02749 345 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 DLX1P56177 255 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 KRTDAPP60985 99 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 C5orf64Q2M2E5 130 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 TDRG1Q3Y452 100 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 MINOS1Q5TGZ0 78 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 PRR27Q6MZM9 219 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 SIGLEC15Q6ZMC9 328 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 OR4F17Q8NGA8 305 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 CHCHD1Q96BP2 118 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 NDFIP1Q9BT67 221 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 GSX1Q9H4S2 264 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 MINOS1-NBL1R4GNA1 71 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 POLEQ07864 2286 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 CFAP47Q6ZTR5 3102 aa9.88□□□□□ -0.83
ECHDC1-209ENST00000454591 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 LOC105371242A0A075B767 164 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 A0A1B0GW15 77 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 GRNP28799 593 aaKnown RBP9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 FCGR2BP31994 310 aaPredicted RBP9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 PLGLAQ15195 96 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 CCDC144NLQ6NUI1 221 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 TTC9CQ8N5M4 171 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 DAZAP1Q96EP5 407 aaKnown RBP9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 RNF125Q96EQ8 232 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 PKDREJQ9NTG1 2253 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 PCNX1Q96RV3 2341 aa9.87□□□□□ -0.83
ECHDC1-209ENST00000454591 IGHV3-21A0A0B4J1V1 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms