RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 EAF1Q96JC9 268 aaPredicted RBP8.47□□□□□ -1.05
PKP4-206ENST00000452162 TMEM68Q96MH6 324 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 MDFIC2A0A1B0GVS7 189 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 I3L2K1 104 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 K7EN84 100 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 S100A8P05109 93 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 TRGC1P0CF51 173 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 MEOX2P50222 304 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 UBE2L3P68036 154 aaKnown RBP8.47□□□□□ -1.05
PKP4-206ENST00000452162 TEX38Q6PEX7 206 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 DYNAPQ8N1N2 210 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 OR2T10Q8NGZ9 312 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 IMMP2LQ96T52 175 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 CDC42EP3Q9UKI2 254 aa8.47□□□□□ -1.05
PKP4-206ENST00000452162 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
PKP4-206ENST00000452162 IGHV3-21A0A0B4J1V1 117 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 A0A1W2PPQ1 181 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 OOSP1A8MZH6 123 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 J3QLI3 93 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 TYMSP04818 313 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 CRYBB3P26998 211 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 NDUFA6P56556 154 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 MAJINQ3KP22 176 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 MINOS1Q5TGZ0 78 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 MINOS1-NBL1R4GNA1 71 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 PYYP10082 97 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 HNF1AP20823 631 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 CD24P25063 80 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 CCDC144NLQ6NUI1 221 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 KCNIP4Q6PIL6 250 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 Q8N6K4 173 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 FXYD5Q96DB9 178 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 PAXXQ9BUH6 204 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 WNT10AQ9GZT5 417 aa8.46□□□□□ -1.06
PKP4-206ENST00000452162 HELTA6NFD8 242 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 PPP5D1E7EU14 171 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 CNIH1O95406 144 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 PLP1P60201 277 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 SUMO1P63165 101 aaKnown RBP8.45□□□□□ -1.06
PKP4-206ENST00000452162 SSX2Q16385 188 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 C5orf64Q2M2E5 130 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 LINC00305Q7Z4B0 112 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 OR51M1Q9H341 326 aa8.45□□□□□ -1.06
PKP4-206ENST00000452162 IGLC1P0CG04 106 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 SMIM6P0DI80 62 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 SRD5A1P18405 259 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 CDX1P47902 265 aaPredicted RBP8.44□□□□□ -1.06
PKP4-206ENST00000452162 FAM3BP58499 235 aaPredicted RBP8.44□□□□□ -1.06
PKP4-206ENST00000452162 FOXL1Q12952 345 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 EBI3Q14213 229 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 FXYD3Q14802 87 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 OR10G8Q8NGN5 311 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 K7EIM0 57 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 ORM2P19652 201 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 HES1Q14469 280 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 KLF17Q5JT82 389 aaPredicted RBP8.44□□□□□ -1.06
PKP4-206ENST00000452162 OR1B1Q8NGR6 318 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 IGF2BP2-AS1Q96M15 143 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 TCEAL7Q9BRU2 100 aa8.44□□□□□ -1.06
PKP4-206ENST00000452162 IGHV3OR16-10A0A075B7F0 116 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 HYPMO75409 117 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 GNG4P50150 75 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 ZNF329Q86UD4 541 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 SGMS2Q8NHU3 365 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 AJUBAQ96IF1 538 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 TBX15Q96SF7 602 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 TOX4O94842 621 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 FSHBP01225 129 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 IGLV2-8P01709 118 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 IGHV4-38-2P0DP08 117 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 TMEM11P17152 192 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 MYCNOSP40205 109 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 ACTL10Q5JWF8 245 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 STXBP6Q8NFX7 210 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 OR1L6Q8NGR2 347 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 BTF3L4Q96K17 158 aa8.43□□□□□ -1.06
PKP4-206ENST00000452162 FAM103A1Q9BTL3 118 aaKnown RBP8.43□□□□□ -1.06
PKP4-206ENST00000452162 TBL2Q9Y4P3 447 aaKnown RBP8.43□□□□□ -1.06
PKP4-206ENST00000452162 ATRQ13535 2644 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 IGKV1-17P01599 117 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 GP9P14770 177 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 TIGITQ495A1 244 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 ASPHD1Q5U4P2 390 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 HIST3H2BBQ8N257 126 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 TRAV40A0A0B4J280 105 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 A6NJY4 79 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 NPIPB5A8MRT5 1133 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 PSG1P11464 419 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 UBE2E1P51965 193 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 RPL15P61313 204 aaKnown RBP8.42□□□□□ -1.06
PKP4-206ENST00000452162 NDPQ00604 133 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 OR5I1Q13606 314 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 GFI1BQ5VTD9 330 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 ARPC1AQ92747 370 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 IL36BQ9NZH7 164 aa8.42□□□□□ -1.06
PKP4-206ENST00000452162 TRAV9-1A0A075B6T8 112 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms