RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 LYRM7Q5U5X0 104 aa12.91□□□□□ -0.34
SIK3-205ENST00000446921 CRIPAKQ8N1N5 446 aa12.91□□□□□ -0.34
SIK3-205ENST00000446921 MLANAQ16655 118 aa12.91□□□□□ -0.34
SIK3-205ENST00000446921 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
SIK3-205ENST00000446921 SPANXA1Q9NS26 97 aa12.91□□□□□ -0.34
SIK3-205ENST00000446921 NOTCH4Q99466 2003 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 TMEM196Q5HYL7 178 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 LHX8Q68G74 356 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 LINC00694P0DN24 101 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 SRYQ05066 204 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 DEFB133Q30KQ1 61 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 DUX4L9Q6RFH8 374 aaPredicted RBP12.9□□□□□ -0.34
SIK3-205ENST00000446921 CEND1Q8N111 149 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 RPRMLQ8N4K4 120 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 FER1L5A0AVI2 2057 aa12.9□□□□□ -0.34
SIK3-205ENST00000446921 MYOD1P15172 320 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
SIK3-205ENST00000446921 LOXL1Q08397 574 aaPredicted RBP12.89□□□□□ -0.35
SIK3-205ENST00000446921 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 TNCP24821 2201 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 TFF1P04155 84 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 FAM231DQ6ZW35 169 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
SIK3-205ENST00000446921 C10orf113Q5VZT2 155 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 KMT2EQ8IZD2 1858 aa12.89□□□□□ -0.35
SIK3-205ENST00000446921 A0A087WX48 190 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 E9PLD3 99 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 HBDP02042 147 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 LGALS9BQ3B8N2 356 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 ASCL5Q7RTU5 278 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 NRGNQ92686 78 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 TIMD4Q96H15 378 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 RASL11BQ9BPW5 248 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 TRBV25-1A0A075B6N4 114 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 MOSP00540 346 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 Q8TCH9 128 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 DSCAML1Q8TD84 2053 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 KLF17Q5JT82 389 aaPredicted RBP12.88□□□□□ -0.35
SIK3-205ENST00000446921 ZNF474Q6S9Z5 364 aaPredicted RBP12.88□□□□□ -0.35
SIK3-205ENST00000446921 OR1L4Q8NGR5 311 aa12.88□□□□□ -0.35
SIK3-205ENST00000446921 FGF23Q9GZV9 251 aaPredicted RBP12.88□□□□□ -0.35
SIK3-205ENST00000446921 HOXA3O43365 443 aaPredicted RBP12.87□□□□□ -0.35
SIK3-205ENST00000446921 PLGLB1Q02325 96 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 FOXC2Q99958 501 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 EPDR1Q9UM22 224 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 D6R8Y8 96 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 MRPL33O75394 65 aaKnown RBP12.87□□□□□ -0.35
SIK3-205ENST00000446921 SSR4P51571 173 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 YPEL5P62699 121 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 DIAPH2-AS1Q14236 149 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 TMEM155Q4W5P6 130 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 ASCL2Q99929 193 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 A0A1B0GXF2 115 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 ARMS2P0C7Q2 107 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
SIK3-205ENST00000446921 COL9A1P20849 921 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 ZNF441Q8N8Z8 693 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 ZNF256Q9Y2P7 627 aaPredicted RBP12.86□□□□□ -0.35
SIK3-205ENST00000446921 TRAV4A0A0B4J268 109 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 C9JAW5 83 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 J3KT08 172 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 DUX1O43812 170 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 LINC00271P0C7V0 271 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 RRN3P1Q2M238 152 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 ZNF503Q96F45 646 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 DUX5Q96PT3 197 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 HIGD1AQ9Y241 93 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 PRRG2O14669 202 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 CKS2P33552 79 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 VEGFBP49765 207 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 DCTN5Q9BTE1 182 aa12.86□□□□□ -0.35
SIK3-205ENST00000446921 AGRNO00468 2067 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 CEP290O15078 2479 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 OOEPA6NGQ2 149 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 J3QT63 122 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 MORN5Q5VZ52 161 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 CIARTQ8N365 385 aaPredicted RBP12.85□□□□□ -0.35
SIK3-205ENST00000446921 RTL8AQ9BWD3 113 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 TPRP12270 2363 aaKnown RBP12.85□□□□□ -0.35
SIK3-205ENST00000446921 Q6ZSR3 168 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 OR10J6PQ8NGY7 276 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 RPEQ96AT9 228 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 TRBV6-6A0A0A6YYG2 114 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 RHODO00212 210 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 FOXF2Q12947 444 aa12.85□□□□□ -0.35
SIK3-205ENST00000446921 FAM19A5Q7Z5A7 132 aaPredicted RBP12.85□□□□□ -0.35
SIK3-205ENST00000446921 ZGRF1Q86YA3 2104 aa12.84□□□□□ -0.35
SIK3-205ENST00000446921 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
SIK3-205ENST00000446921 FKBP2P26885 142 aaKnown RBP12.84□□□□□ -0.35
SIK3-205ENST00000446921 HSPE1P61604 102 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms