RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NOTCH3Q9UM47 2321 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 PHLPP1O60346 1717 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 ODF3BA8MYP8 253 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 H7C2G1 150 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 FXYD2P54710 66 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 UBE2BP63146 152 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 DEFB134Q4QY38 66 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 PRR9Q5T870 116 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 BCL2L15Q5TBC7 163 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 Q6ZS52 159 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 TMEM229BQ8NBD8 167 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 OR4K15Q8NH41 348 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 TMEM203Q969S6 136 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 BORCS8Q96FH0 119 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 ZC2HC1AQ96GY0 325 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 PSORS1C2Q9UIG4 136 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 HHLA3Q9XRX5 114 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 MYO3AQ8NEV4 1616 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 MED23Q9ULK4 1368 aa2.86□□□□□ -1.95
TM9SF3-202ENST00000443638 LCTP09848 1927 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 ZNF638Q14966 1978 aaKnown RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 A0A096LPI6 279 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 TRBV10-2A0A0K0K1G8 114 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 GABARAPH6UMI1 98 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 PGLYRP1O75594 196 aaPredicted RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 CMPK1P30085 196 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 DYNLT3P51808 116 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 EIF3IQ13347 325 aaKnown RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 MORN2Q502X0 79 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 PABPC1L2AQ5JQF8 200 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 FAM27BQ5VT28 67 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 LINC00167Q96N53 147 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 YPEL2Q96QA6 119 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 C12orf57Q99622 126 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 CACYBPQ9HB71 228 aaKnown RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 POPDC3Q9HBV1 291 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 CALML5Q9NZT1 146 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 TRAPPC2LQ9UL33 140 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 TIMM9Q9Y5J7 89 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 U3KQ87 197 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 ZNF106Q9H2Y7 1883 aaKnown RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 CACNA1DQ01668 2161 aa2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 ZNF142P52746 1687 aaPredicted RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 SMG6Q86US8 1419 aaKnown RBP2.85□□□□□ -1.95
TM9SF3-202ENST00000443638 MAST2Q6P0Q8 1798 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 A2ML1A8K2U0 1454 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 UGGT2Q9NYU1 1516 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 NHSL1Q5SYE7 1610 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 IGHV1-18A0A0C4DH31 117 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 FAM25AB3EWG3 89 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 FAM25CB3EWG5 89 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 FAM25GB3EWG6 89 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 G3V3Q6 166 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 TCL1BO95988 128 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 FUSP35637 526 aaKnown RBP eCLIP2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 EIF2B2P49770 351 aaKnown RBP2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 SLC38A11Q08AI6 406 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 SH2D6Q7Z4S9 175 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 SLC35E3Q7Z769 313 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 OR8I2Q8N0Y5 310 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 TSTD1Q8NFU3 115 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 TMEM106AQ96A25 262 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 PKMYT1Q99640 499 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 GGACTQ9BVM4 153 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 OR2H1Q9GZK4 316 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 NAT8BQ9UHF3 227 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 EP400Q96L91 3159 aa2.84□□□□□ -1.95
TM9SF3-202ENST00000443638 RTL9Q8NET4 1388 aa2.84□□□□□ -1.96
TM9SF3-202ENST00000443638 CCNB3Q8WWL7 1395 aa2.84□□□□□ -1.96
TM9SF3-202ENST00000443638 SHANK1Q9Y566 2161 aa2.84□□□□□ -1.96
TM9SF3-202ENST00000443638 KIF13BQ9NQT8 1826 aa2.84□□□□□ -1.96
TM9SF3-202ENST00000443638 RTEL1-TNFRSF6BF6WH68 1400 aa2.84□□□□□ -1.96
TM9SF3-202ENST00000443638 ABCC1P33527 1531 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 CDK13Q14004 1512 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 DIP2CQ9Y2E4 1556 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 POLR1AO95602 1720 aaPredicted RBP2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 IGHV3-64A0A075B6Q5 118 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 TRAV5A0A0B4J249 113 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 MUC21A0A0G2JKD1 596 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 MUC21A0A140T8X8 626 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 ODAMA1E959 279 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 C9JAW5 83 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 OR2H2O95918 312 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 SHBGP04278 402 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 CXCL1P09341 107 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 P0DMU3 169 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 FAM231AP0DMU4 169 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 FAM231CP0DMU5 169 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 COX6A1P12074 109 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 LGALS3P17931 250 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 CSRP1P21291 193 aaKnown RBP2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 EVI2AP22794 236 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 RRAS2P62070 204 aaPredicted RBP2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 MSMO1Q15800 293 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 PYDC2Q56P42 97 aa2.83□□□□□ -1.96
TM9SF3-202ENST00000443638 IGFL1Q6UW32 110 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms