RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KRT222Q8N1A0 295 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 GPR32P1Q8NGA4 272 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 RNF133Q8WVZ7 376 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 TMBIM1Q969X1 311 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 MS4A6EQ96DS6 147 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZHX1-C8orf76Q96EF9 292 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZNF471Q9BX82 626 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 NKX6-2Q9C056 277 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 CXorf21Q9HAI6 301 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 HES4Q9HCC6 221 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 MRPL16Q9NX20 251 aaKnown RBP1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 TAS2R9Q9NYW1 312 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 USE1Q9NZ43 259 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 HDGFL3Q9Y3E1 203 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 NUP210LQ5VU65 1888 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 STAB2Q8WWQ8 2551 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 CCDC88CQ9P219 2028 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 BIRC6Q9NR09 4857 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 IGHV3-15A0A0B4J1V0 119 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 IGHV1-69-2A0A0G2JMI3 117 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR51F1A6NGY5 319 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 C17orf51A8MQB3 221 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 ATP6V1G2-DDX39BF2Z307 99 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 LYNX1G3V0Z9 82 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 H0Y980 276 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 CCL22O00626 93 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 PROSCO94903 275 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 KRT75O95678 551 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 MT-CO2P00403 227 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 TYMSP04818 313 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 OCM2P0CE71 109 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 LYNX1P0DP58 116 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 ESDP10768 282 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 NQO1P15559 274 aaKnown RBP1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 BLVRBP30043 206 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 DDTP30046 118 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 GLRXP35754 106 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 PPP1CCP36873 323 aaKnown RBP1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 SSR2P43308 183 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 RAP1GDS1P52306 607 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 DYNLT1P63172 113 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 HLA-DRB3P79483 266 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 SARNPP82979 210 aaKnown RBP1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 DEFB112Q30KQ8 113 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 RASL11AQ6T310 242 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 MMGT1Q8N4V1 131 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 DEFB108BQ8NET1 73 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR11H1Q8NG94 326 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR51D1Q8NGF3 324 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR2D3Q8NGH3 330 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 EEF1AKMT1Q8WVE0 214 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 EFCAB11Q9BUY7 163 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 AICDAQ9GZX7 198 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 MAP1LC3AQ9H492 121 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 UBAP1Q9NZ09 502 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 MED11Q9P086 117 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 ALG5Q9Y673 324 aa1.36□□□□□ -2.19
HMGB1P27-201ENST00000431429 PLCE1Q9P212 2302 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 MALRD1Q5VYJ5 2156 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 MED12Q93074 2177 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 CR1P17927 2039 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 PCLOQ9Y6V0 5065 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 IGLV3-32A0A0A0MS00 114 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 IGHV3-73A0A0B4J1V6 119 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 IGHV1-18A0A0C4DH31 117 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 A0A0J9YW62 118 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 C5orf49A4QMS7 147 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 APOC4-APOC2K7ER74 178 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 SLC17A3O00476 420 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 SSNA1O43805 119 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 LY6G6CO95867 125 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 APOC2P02655 101 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 IL3P08700 152 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 CPMP14384 443 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 CBR1P16152 277 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 OGNP20774 298 aaKnown RBP1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 ATP6V0CP27449 155 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 MAGOHP61326 146 aaKnown RBP1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 CCL8P80075 99 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 REEP5Q00765 189 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 PPP1R1AQ13522 171 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 GNA13Q14344 377 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 JOSD1Q15040 202 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 TMEM176BQ3YBM2 270 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 TMEM155Q4W5P6 130 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 COQ5Q5HYK3 327 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 CD200R1LQ6Q8B3 271 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 C4orf22Q6V702 233 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 PIGXQ8TBF5 258 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 C11orf40Q8WZ69 217 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 PARD6GQ9BYG4 376 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 POLR1DQ9Y2S0 133 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 DSPPQ9NZW4 1301 aa1.35□□□□□ -2.19
HMGB1P27-201ENST00000431429 FREM3P0C091 2139 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 EML6Q6ZMW3 1958 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 TMED7-TICAM2A0A0A6YYA0 188 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 MUC21A0A0G2JKD1 596 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 MUC21A0A140T8X8 626 aa1.34□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR6C6A6NF89 314 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms