RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 TMEM240Q5SV17 173 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 UTF1Q5T230 341 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 GDF5OSQ5U4N7 250 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 AAED1Q7RTV5 226 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 SBSPONQ8IVN8 264 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 YAF2Q8IY57 180 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 SLC37A2Q8TED4 501 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 GPHA2Q96T91 129 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZMAT4Q9H898 229 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 TIMM8BQ9Y5J9 83 aaPredicted RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 U3KQK5 164 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 KIAA2026Q5HYC2 2103 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 LOC102723996A0A087X1L8 192 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 A0A1W2PQF6 199 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 LINC01546A6NGU7 62 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 OTOL1A6NHN0 477 aaPredicted RBP4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 SH2D7A6NKC9 451 aaPredicted RBP4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 INS-IGF2F8WCM5 200 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 UQCRQO14949 82 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 AGFG2O95081 481 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 OR2H2O95918 312 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 SPTBP11277 2137 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 DEFA4P12838 97 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 ORM2P19652 201 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 FCER1GP30273 86 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 EMP1P54849 157 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 MFAP4P55083 255 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 RPS16P62249 146 aaKnown RBP4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRCDQ00LT1 54 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 EDDM3AQ14507 147 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 C3AR1Q16581 482 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 C17orf99Q6UX52 265 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 LINC00173Q6ZV60 143 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 LYPD1Q8N2G4 141 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 MYOZ3Q8TDC0 251 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF296Q8WUU4 475 aaPredicted RBP4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF524Q96C55 264 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 RITA1Q96K30 269 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 LINC01600Q96MT4 127 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 MLST8Q9BVC4 326 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRRG4Q9BZD6 226 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 OTORQ9NRC9 128 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM14BQ9NUH8 114 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 DOCK8Q8NF50 2099 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 PCNX3Q9H6A9 2034 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 CACNA1CQ13936 2221 aa4.53□□□□□ -1.68
VTI1BP4-201ENST00000427516 ATG2BQ96BY7 2078 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRAV2A0A0B4J234 112 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRAV12-1A0A0B4J245 112 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 LOC107984156A0A0G2JMH3 177 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 PGPA6NDG6 321 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 C17orf98A8MV24 154 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 PAX4O43316 350 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 FCGR3BO75015 233 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 DUSP14O95147 198 aaKnown RBP4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 CKS2P33552 79 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ID1P41134 155 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 CXCL12P48061 93 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 PSMB2P49721 201 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 CCL11P51671 97 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZNF137PP52743 207 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 UBE2D3P61077 147 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 UBE2D2P62837 147 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 CD69Q07108 199 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ATXN8Q156A1 80 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 AMTNQ6UX39 209 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 Q71RC1 249 aaPredicted RBP4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM214BQ7L5A3 538 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 Q86TA4 180 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 PCP2Q8IVA1 136 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ARL17AQ8IVW1 177 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 C1orf210Q8IVY1 113 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 TMEM75Q8N9X5 138 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZNRF2Q8NHG8 242 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 FAM168AQ92567 244 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ZNF576Q9H609 170 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 ARID1AO14497 2285 aa4.52□□□□□ -1.69
VTI1BP4-201ENST00000427516 TRBV7-7A0A0K0K1E9 115 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 C12orf77C9JDV5 145 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 C15orf65H3BRN8 121 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 K7ERJ3 54 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 M0R2P5 195 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 NDUFA7O95182 113 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TGFAP01135 160 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 RBP4P02753 201 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TCRAP04437 139 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 COX6CP09669 75 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 MYOD1P15172 320 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 B4GALT1P15291 398 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 SLC25A16P16260 332 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 MYCNOSP40205 109 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 UCNP55089 124 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TNFAIP6P98066 277 aaPredicted RBP4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 SRSF2Q01130 221 aaKnown RBP4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 DAZAP2Q15038 168 aaPredicted RBP4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 TMEM170BQ5T4T1 132 aa4.51□□□□□ -1.69
VTI1BP4-201ENST00000427516 C9orf153Q5TBE3 101 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms