RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 KRTAP1-1Q07627 177 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 KIAA0141Q14154 515 aaPredicted RBP11.83□□□□□ -0.52
ACTB-204ENST00000425660 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 SMIM7Q9BQ49 75 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 LINC00527Q9UJ94 153 aa11.83□□□□□ -0.52
ACTB-204ENST00000425660 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
ACTB-204ENST00000425660 NUPL2O15504 423 aaKnown RBP11.82□□□□□ -0.52
ACTB-204ENST00000425660 PYYP10082 97 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 GP9P14770 177 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 RPUSD4Q96CM3 377 aaKnown RBP11.82□□□□□ -0.52
ACTB-204ENST00000425660 ZNF414Q96IQ9 312 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 NOL4LQ96MY1 436 aaPredicted RBP11.82□□□□□ -0.52
ACTB-204ENST00000425660 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 CHRDL1Q9BU40 450 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 C20orf24Q9BUV8 137 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 SDF2L1Q9HCN8 221 aa11.82□□□□□ -0.52
ACTB-204ENST00000425660 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 H3BRN7 92 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 IGLV1-40P01703 118 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
ACTB-204ENST00000425660 TMEM88Q6PEY1 159 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 MS4A10Q96PG2 267 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 MYO9AB2RTY4 2548 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 B4DEV8 164 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 CLEC3BP05452 202 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 GPR183P32249 361 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 S100A7AQ86SG5 101 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 RPS10P5Q9NQ39 176 aa11.81□□□□□ -0.52
ACTB-204ENST00000425660 A0A087WWC5 75 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 SCO2A0A1W2PP80 73 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
ACTB-204ENST00000425660 CD5LO43866 347 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 NDUFB4O95168 129 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 TMEM241Q24JQ0 296 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
ACTB-204ENST00000425660 TRGV3P03979 118 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 MYCNOSP40205 109 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 LEMD1Q68G75 181 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 TGOLN2O43493 480 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 TCEAL7Q9BRU2 100 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 DERL1Q9BUN8 251 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 SMCO4Q9NRQ5 59 aa11.79□□□□□ -0.52
ACTB-204ENST00000425660 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
ACTB-204ENST00000425660 AKR1C3P42330 323 aa11.78□□□□□ -0.52
ACTB-204ENST00000425660 SUMO1P63165 101 aaKnown RBP11.78□□□□□ -0.52
ACTB-204ENST00000425660 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
ACTB-204ENST00000425660 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
ACTB-204ENST00000425660 TRBV20OR9-2A0A075B6H5 130 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 ZNF98A6NK75 572 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 IGHG4P01861 327 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 TPPP2P59282 170 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 RPL23P62829 140 aaKnown RBP11.77□□□□□ -0.52
ACTB-204ENST00000425660 BPIFA4PQ86YQ2 179 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 TMEM86BQ8N661 226 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.52
ACTB-204ENST00000425660 C2CD4CQ8TF44 421 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 NPFFR1Q9GZQ6 430 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 TMEM242Q9NWH2 141 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 RNF24Q9Y225 148 aa11.77□□□□□ -0.52
ACTB-204ENST00000425660 BMPR1BO00238 502 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 TSPAN4O14817 238 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 MRPS12O15235 138 aaKnown RBP11.76□□□□□ -0.53
ACTB-204ENST00000425660 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
ACTB-204ENST00000425660 PRSS22Q9GZN4 317 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 KLK15Q9H2R5 256 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 C9JCJ5 164 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 CRYBB3P26998 211 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 PSMB8P28062 276 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
ACTB-204ENST00000425660 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 LINC01551Q86U37 167 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 ZNF329Q86UD4 541 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 SIGLECL1Q8N7X8 197 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 TMEM190Q8WZ59 177 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 ZNF702PQ9H963 129 aa11.76□□□□□ -0.53
ACTB-204ENST00000425660 A0A0G2JLM5 398 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 S100A7P31151 101 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 RAB9AP51151 201 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 TMEM95Q3KNT9 176 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 Q8N2B8 174 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 ACANP16112 2415 aa11.75□□□□□ -0.53
ACTB-204ENST00000425660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
ACTB-204ENST00000425660 CXorf65A6NEN9 183 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms