RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 ST8SIA3O43173 380 aa11.72□□□□□ -0.53
PUDP-203ENST00000424830 GNG7O60262 68 aa11.72□□□□□ -0.53
PUDP-203ENST00000424830 KRASP01116 189 aa11.72□□□□□ -0.53
PUDP-203ENST00000424830 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
PUDP-203ENST00000424830 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
PUDP-203ENST00000424830 PVRIGQ6DKI7 326 aa11.72□□□□□ -0.53
PUDP-203ENST00000424830 Q6ZTC4 211 aa11.72□□□□□ -0.53
PUDP-203ENST00000424830 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
PUDP-203ENST00000424830 RRNAD1Q96FB5 475 aaKnown RBP11.72□□□□□ -0.53
PUDP-203ENST00000424830 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 E5RGE8 158 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 TAAR5O14804 337 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.53
PUDP-203ENST00000424830 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 SLC25A6P12236 298 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 G6PCP35575 357 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 S100A10P60903 97 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 RBMY1FQ15415 496 aaKnown RBP11.71□□□□□ -0.53
PUDP-203ENST00000424830 NMSQ5H8A3 153 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 OR4D5Q8NGN0 318 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 RBPMSQ93062 196 aaKnown RBP11.71□□□□□ -0.53
PUDP-203ENST00000424830 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 SLC25A32Q9H2D1 315 aa11.71□□□□□ -0.53
PUDP-203ENST00000424830 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.53
PUDP-203ENST00000424830 PKD1P98161 4303 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 I3L2K1 104 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 K7EPK0 472 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 MT-CO2P00403 227 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 MBPP02686 304 aaPredicted RBP11.7□□□□□ -0.54
PUDP-203ENST00000424830 SPP1P10451 314 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 LPAR6P43657 344 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
PUDP-203ENST00000424830 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
PUDP-203ENST00000424830 AMBPP02760 352 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 NMBP08949 121 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 P0DMU3 169 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 FAM231AP0DMU4 169 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 FAM231CP0DMU5 169 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 TPT1P13693 172 aaKnown RBP11.69□□□□□ -0.54
PUDP-203ENST00000424830 EIF5AP63241 154 aaKnown RBP11.69□□□□□ -0.54
PUDP-203ENST00000424830 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
PUDP-203ENST00000424830 ALKAL2Q6UX46 152 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 TOMM20LQ6UXN7 152 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 PINX1Q96BK5 328 aaKnown RBP11.69□□□□□ -0.54
PUDP-203ENST00000424830 CYTL1Q9NRR1 136 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 TMEM14BQ9NUH8 114 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 RABAC1Q9UI14 185 aa11.69□□□□□ -0.54
PUDP-203ENST00000424830 DYNC1H1Q14204 4646 aaKnown RBP11.69□□□□□ -0.54
PUDP-203ENST00000424830 IGHV3-66A0A0C4DH42 116 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 ZNF705EA8MWA4 302 aaPredicted RBP11.68□□□□□ -0.54
PUDP-203ENST00000424830 IGHV3-48P01763 117 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
PUDP-203ENST00000424830 P2RY1P47900 373 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 TRPT1Q86TN4 253 aaKnown RBP11.68□□□□□ -0.54
PUDP-203ENST00000424830 FAM24BQ8N5W8 94 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 POM121L12Q8N7R1 296 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 C11orf1Q9H5F2 150 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 LSM5Q9Y4Y9 91 aaKnown RBP11.68□□□□□ -0.54
PUDP-203ENST00000424830 AGRNO00468 2067 aa11.68□□□□□ -0.54
PUDP-203ENST00000424830 A0A1B0GU03 582 aa11.67□□□□□ -0.54
PUDP-203ENST00000424830 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
PUDP-203ENST00000424830 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
PUDP-203ENST00000424830 NPBWR1P48145 328 aa11.67□□□□□ -0.54
PUDP-203ENST00000424830 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
PUDP-203ENST00000424830 LRRC20Q8TCA0 184 aa11.67□□□□□ -0.54
PUDP-203ENST00000424830 NDUFAF3Q9BU61 184 aa11.67□□□□□ -0.54
PUDP-203ENST00000424830 ELOA3CA0A087WX78 387 aaPredicted RBP11.66□□□□□ -0.54
PUDP-203ENST00000424830 DEFB131BA0A096LNP1 70 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 RTL8CO15255 209 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 PITX3O75364 302 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 SCGB1D2O95969 90 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 NKX2-1P43699 371 aaPredicted RBP11.66□□□□□ -0.54
PUDP-203ENST00000424830 ID3Q02535 119 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 ZNF600Q6ZNG1 722 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 BAP18Q8IXM2 172 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 OR4A16Q8NH70 328 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 PUS1Q9Y606 427 aaKnown RBP eCLIP11.66□□□□□ -0.54
PUDP-203ENST00000424830 X6R8D5 127 aa11.66□□□□□ -0.54
PUDP-203ENST00000424830 A0A1W2PS18 150 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 M0R2N4 97 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 PVALBP20472 110 aaPredicted RBP11.65□□□□□ -0.54
PUDP-203ENST00000424830 ERHP84090 104 aaKnown RBP11.65□□□□□ -0.54
PUDP-203ENST00000424830 PRCDQ00LT1 54 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 COMMD7Q86VX2 200 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 STXBP6Q8NFX7 210 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 GRAMD2BQ96HH9 432 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 ZFAND3Q9H8U3 227 aa11.65□□□□□ -0.54
PUDP-203ENST00000424830 RCL1Q9Y2P8 373 aaKnown RBP11.65□□□□□ -0.54
PUDP-203ENST00000424830 ATG12O94817 140 aa11.64□□□□□ -0.55
PUDP-203ENST00000424830 EIF5AL1Q6IS14 154 aaKnown RBP11.64□□□□□ -0.55
PUDP-203ENST00000424830 H2BFWTQ7Z2G1 175 aa11.64□□□□□ -0.55
PUDP-203ENST00000424830 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
PUDP-203ENST00000424830 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
PUDP-203ENST00000424830 CLEC5AQ9NY25 188 aa11.64□□□□□ -0.55
PUDP-203ENST00000424830 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
PUDP-203ENST00000424830 K7EQG2 157 aa11.63□□□□□ -0.55
PUDP-203ENST00000424830 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms