RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 INS-IGF2F8WCM5 200 aa17.05■□□□□ 0.32
USP48-205ENST00000421625 HLA-DRB1P01911 266 aa17.05■□□□□ 0.32
USP48-205ENST00000421625 FAM87AP0C7U9 286 aa17.05■□□□□ 0.32
USP48-205ENST00000421625 TPSG1Q9NRR2 321 aa17.05■□□□□ 0.32
USP48-205ENST00000421625 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
USP48-205ENST00000421625 PLCE1Q9P212 2302 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 TCRAP04437 139 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 OR5AL1P0C617 328 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 CCL3L1P16619 93 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 GPR183P32249 361 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 CIARTQ8N365 385 aaPredicted RBP17.04■□□□□ 0.32
USP48-205ENST00000421625 C5orf17Q8NAS9 161 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 TMEM167AQ8TBQ9 72 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 Q9H3A6 140 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 DKK4Q9UBT3 224 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 IGHV3-21A0A0B4J1V1 117 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 GAGE12BA1L429 117 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 ARF6P62330 175 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 TNFAIP6P98066 277 aaPredicted RBP17.04■□□□□ 0.32
USP48-205ENST00000421625 ZCCHC24Q8N2G6 241 aaKnown RBP17.04■□□□□ 0.32
USP48-205ENST00000421625 OR5AN1Q8NGI8 311 aa17.04■□□□□ 0.32
USP48-205ENST00000421625 TM4SF5O14894 197 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 C2orf91Q6ZV80 131 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 TEX45Q8NA69 505 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 STXBP6Q8NFX7 210 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 MS4A6AQ9H2W1 248 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 GP9P14770 177 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 GATA4P43694 442 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 SUB1P53999 127 aaKnown RBP eCLIP17.03■□□□□ 0.32
USP48-205ENST00000421625 HCP5Q6MZN7 132 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 GFRA4Q9GZZ7 299 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 HSPB8Q9UJY1 196 aa17.03■□□□□ 0.32
USP48-205ENST00000421625 A0A1W2PPI3 338 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 APOHP02749 345 aaPredicted RBP17.02■□□□□ 0.32
USP48-205ENST00000421625 GLRXP35754 106 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 LINC01545Q5VT33 79 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 SMIM15Q7Z3B0 74 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 NCR2O95944 276 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 IGHV1-46P01743 117 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 WT1P19544 449 aaPredicted RBP17.02■□□□□ 0.32
USP48-205ENST00000421625 COL8A1P27658 744 aa17.02■□□□□ 0.32
USP48-205ENST00000421625 NEU4Q8WWR8 484 aaPredicted RBP17.02■□□□□ 0.32
USP48-205ENST00000421625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.02■□□□□ 0.31
USP48-205ENST00000421625 hADV38S2A0JD32 116 aa17.02■□□□□ 0.31
USP48-205ENST00000421625 APELAP0DMC3 54 aa17.02■□□□□ 0.31
USP48-205ENST00000421625 PRB4P10163 310 aaPredicted RBP17.02■□□□□ 0.31
USP48-205ENST00000421625 HTR1DP28221 377 aa17.02■□□□□ 0.31
USP48-205ENST00000421625 CCL11P51671 97 aa17.02■□□□□ 0.31
USP48-205ENST00000421625 CUL9Q8IWT3 2517 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 AKAP13Q12802 2813 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 FTH1P19P0C7X4 201 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 OVOL3O00110 214 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 IGLV2-23P01705 113 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 OR4C13Q8NGP0 309 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 SELENOKQ9Y6D0 94 aa17.01■□□□□ 0.31
USP48-205ENST00000421625 IGLV3-9A0A075B6K5 115 aa17■□□□□ 0.31
USP48-205ENST00000421625 C7orf71A4D174 169 aa17■□□□□ 0.31
USP48-205ENST00000421625 NPIPB6E9PJ23 425 aa17■□□□□ 0.31
USP48-205ENST00000421625 SLC25A17O43808 307 aa17■□□□□ 0.31
USP48-205ENST00000421625 COX8AP10176 69 aa17■□□□□ 0.31
USP48-205ENST00000421625 Q86TA4 180 aa17■□□□□ 0.31
USP48-205ENST00000421625 RITA1Q96K30 269 aa17■□□□□ 0.31
USP48-205ENST00000421625 ASCL2Q99929 193 aa17■□□□□ 0.31
USP48-205ENST00000421625 PEF1Q9UBV8 284 aaKnown RBP17■□□□□ 0.31
USP48-205ENST00000421625 LINC00312Q9Y6C7 94 aa17■□□□□ 0.31
USP48-205ENST00000421625 HAX1O00165 279 aa17■□□□□ 0.31
USP48-205ENST00000421625 FAM71F2Q6NXP2 309 aa17■□□□□ 0.31
USP48-205ENST00000421625 FAM169BQ8N8A8 192 aa17■□□□□ 0.31
USP48-205ENST00000421625 FDCSPQ8NFU4 85 aa17■□□□□ 0.31
USP48-205ENST00000421625 DCHS1Q96JQ0 3298 aa17■□□□□ 0.31
USP48-205ENST00000421625 PPIAL4DF5H284 164 aa16.99■□□□□ 0.31
USP48-205ENST00000421625 KLK10O43240 276 aa16.99■□□□□ 0.31
USP48-205ENST00000421625 SARAFQ96BY9 339 aa16.99■□□□□ 0.31
USP48-205ENST00000421625 TMEM30BQ3MIR4 351 aa16.99■□□□□ 0.31
USP48-205ENST00000421625 SEM1Q6ZVN7 128 aa16.99■□□□□ 0.31
USP48-205ENST00000421625 PRNTQ86SH4 94 aa16.99■□□□□ 0.31
USP48-205ENST00000421625 UQCRFS1P47985 274 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 PIP4P1Q86T03 277 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 VSTM2AQ8TAG5 236 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 PRSS47A8MTI9 375 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 NKX2-8O15522 239 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 SAP30O75446 220 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 ARMS2P0C7Q2 107 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 IGLC1P0CG04 106 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 BPIFA4PQ86YQ2 179 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 ZNF747Q9BV97 191 aa16.98■□□□□ 0.31
USP48-205ENST00000421625 FCN3O75636 299 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 EXOC3-AS1Q8N2X6 119 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 OR10X1Q8NGY0 326 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 OR4A5Q8NH83 315 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 AP5S1Q9NUS5 200 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 FAM231BA6NCW3 169 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 GOLT1AQ6ZVE7 132 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 CSTL1Q9H114 145 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 ABCA1O95477 2261 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 MRGPRG-AS1Q2M3A8 158 aa16.97■□□□□ 0.31
USP48-205ENST00000421625 ZNF785A8K8V0 405 aa16.96■□□□□ 0.31
USP48-205ENST00000421625 IGLV2-11P01706 119 aa16.96■□□□□ 0.31
USP48-205ENST00000421625 CRYGCP07315 174 aa16.96■□□□□ 0.31
USP48-205ENST00000421625 FAM106CPP0CH98 169 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms