RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
CALD1-204ENST00000417172 PUS1Q9Y606 427 aaKnown RBP eCLIP13.15□□□□□ -0.3
CALD1-204ENST00000417172 SETXQ7Z333 2677 aaKnown RBP13.15□□□□□ -0.3
CALD1-204ENST00000417172 WI2-2373I1.2A0A1W2PRP0 233 aa13.15□□□□□ -0.3
CALD1-204ENST00000417172 NUPL2O15504 423 aaKnown RBP13.15□□□□□ -0.3
CALD1-204ENST00000417172 IFNA1P01562 189 aa13.15□□□□□ -0.3
CALD1-204ENST00000417172 PSMB3P49720 205 aa13.15□□□□□ -0.3
CALD1-204ENST00000417172 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
CALD1-204ENST00000417172 TRBV7-1A0A0A6YYK4 115 aa13.14□□□□□ -0.31
CALD1-204ENST00000417172 RAB9AP51151 201 aa13.14□□□□□ -0.31
CALD1-204ENST00000417172 TAS2R45P59539 299 aa13.14□□□□□ -0.31
CALD1-204ENST00000417172 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
CALD1-204ENST00000417172 C10orf91Q5T1B1 145 aa13.14□□□□□ -0.31
CALD1-204ENST00000417172 CST9LP1Q5W188 147 aa13.14□□□□□ -0.31
CALD1-204ENST00000417172 ATRAIDQ6UW56 229 aa13.14□□□□□ -0.31
CALD1-204ENST00000417172 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
CALD1-204ENST00000417172 MRPL27Q9P0M9 148 aaKnown RBP13.14□□□□□ -0.31
CALD1-204ENST00000417172 TGOLN2O43493 480 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 FABP1P07148 127 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 SRD5A1P18405 259 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 PMS2P11Q13670 270 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 Q8WTZ3 238 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 RNF2Q99496 336 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 SEC11CQ9BY50 192 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 H3BUA1 57 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 OR2C1O95371 312 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 IGHG4P01861 327 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 PSMB8P28062 276 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 UBE2L3P68036 154 aaKnown RBP13.13□□□□□ -0.31
CALD1-204ENST00000417172 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 TMEM86BQ8N661 226 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 OR4F5Q8NH21 305 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 OR5B12Q96R08 314 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
CALD1-204ENST00000417172 NSD1Q96L73 2696 aaPredicted RBP13.13□□□□□ -0.31
CALD1-204ENST00000417172 C11orf94C9JXX5 98 aa13.12□□□□□ -0.31
CALD1-204ENST00000417172 S100A6P06703 90 aa13.12□□□□□ -0.31
CALD1-204ENST00000417172 PAXXQ9BUH6 204 aa13.12□□□□□ -0.31
CALD1-204ENST00000417172 SERTAD4Q9NUC0 356 aa13.12□□□□□ -0.31
CALD1-204ENST00000417172 TMEM160Q9NX00 188 aa13.12□□□□□ -0.31
CALD1-204ENST00000417172 CARHSP1Q9Y2V2 147 aaKnown RBP13.12□□□□□ -0.31
CALD1-204ENST00000417172 FAM74A7A6NL05 159 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 H3BTX0 84 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 BRI3O95415 125 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 H3BRN7 92 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
CALD1-204ENST00000417172 CD99P14209 185 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 ZNF600Q6ZNG1 722 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 Q8N2B8 174 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 SMDT1Q9H4I9 107 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
CALD1-204ENST00000417172 GP9P14770 177 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 NPPCP23582 126 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 SOHLH1Q5JUK2 328 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 Q6ZSV7 163 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 OR4X2Q8NGF9 303 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 USMG5Q96IX5 58 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
CALD1-204ENST00000417172 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
CALD1-204ENST00000417172 ARL3P36405 182 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 BLNKQ8WV28 456 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
CALD1-204ENST00000417172 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 SCGB2A1O75556 95 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 LINC00518Q8N0U6 118 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
CALD1-204ENST00000417172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.08□□□□□ -0.32
CALD1-204ENST00000417172 CYSRT1A8MQ03 144 aa13.08□□□□□ -0.32
CALD1-204ENST00000417172 ATF4P18848 351 aaPredicted RBP13.08□□□□□ -0.32
CALD1-204ENST00000417172 RPL15P61313 204 aaKnown RBP13.08□□□□□ -0.32
CALD1-204ENST00000417172 ZNF343Q6P1L6 599 aa13.08□□□□□ -0.32
CALD1-204ENST00000417172 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
CALD1-204ENST00000417172 DERL1Q9BUN8 251 aa13.08□□□□□ -0.32
CALD1-204ENST00000417172 GAR1Q9NY12 217 aaKnown RBP13.08□□□□□ -0.32
CALD1-204ENST00000417172 SCO2A0A1W2PP80 73 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 CLPSL1A2RUU4 121 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 ZNF98A6NK75 572 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 ZNF674Q2M3X9 581 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 TEX38Q6PEX7 206 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 IGHV3OR16-13A0A075B7E8 117 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 IGHV3-74A0A0B4J1X5 117 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 A0A0G2JLM5 398 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 H3BQ15 152 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 BMPR1BO00238 502 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 SRSF2Q01130 221 aaKnown RBP13.07□□□□□ -0.32
CALD1-204ENST00000417172 UNQ9165/PRO28630Q6UXU0 137 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
CALD1-204ENST00000417172 SETD2Q9BYW2 2564 aaPredicted RBP13.07□□□□□ -0.32
CALD1-204ENST00000417172 IGHV3-66A0A0C4DH42 116 aa13.06□□□□□ -0.32
CALD1-204ENST00000417172 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms