RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 IL18Q14116 193 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 GAMTQ14353 236 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 SMCO1Q147U7 214 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 ZNF79Q15937 498 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 Q6ZR54 194 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 C1orf158Q8N1D5 194 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 OR1S1Q8NH92 325 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 PRRT1Q99946 306 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 ATG101Q9BSB4 218 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 MIXL1Q9H2W2 232 aa13.72□□□□□ -0.21
UBXN4-202ENST00000415164 IGKV1D-37A0A075B6S9 117 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 SNRPGP15A8MWD9 76 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 SOCS3O14543 225 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 CCR6P51684 374 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 MRPS10P82664 201 aaKnown RBP13.71□□□□□ -0.21
UBXN4-202ENST00000415164 CTF1Q16619 201 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 RNF212Q495C1 297 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 LYZL2Q7Z4W2 148 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 IL22RA2Q969J5 263 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 SLC25A22Q9H936 323 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 RPRMQ9NS64 109 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 HSPB7Q9UBY9 170 aa13.71□□□□□ -0.21
UBXN4-202ENST00000415164 IAPPP10997 89 aa13.7□□□□□ -0.22
UBXN4-202ENST00000415164 SPATA31B1PQ5VZV4 182 aa13.7□□□□□ -0.22
UBXN4-202ENST00000415164 SMIM4Q8WVI0 70 aa13.7□□□□□ -0.22
UBXN4-202ENST00000415164 MCUBQ9NWR8 336 aa13.7□□□□□ -0.22
UBXN4-202ENST00000415164 A0A0J9YX75 114 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 ISLRO14498 428 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 CTDSP2O14595 271 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 GPX4P36969 197 aaPredicted RBP13.69□□□□□ -0.22
UBXN4-202ENST00000415164 C1orf194Q5T5A4 169 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 C20orf173Q96LM9 149 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 DOK5Q9P104 306 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 HSPG2P98160 4391 aa13.69□□□□□ -0.22
UBXN4-202ENST00000415164 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 GALR1P47211 349 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 PAX9P55771 341 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 RAB11AP62491 216 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 OXA1LQ15070 435 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 CLUHP3Q96NS8 147 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 SCP2D1Q9UJQ7 156 aa13.68□□□□□ -0.22
UBXN4-202ENST00000415164 ZNF705GA8MUZ8 300 aaPredicted RBP13.67□□□□□ -0.22
UBXN4-202ENST00000415164 PRM2P04554 102 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 ANXA3P12429 323 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 DIRAS2Q96HU8 199 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 SCGB3A2Q96PL1 93 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 RSG1Q9BU20 258 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 KRTAP4-5Q9BYR2 181 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 SLC25A32Q9H2D1 315 aa13.67□□□□□ -0.22
UBXN4-202ENST00000415164 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 NUDT3O95989 172 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 DEFB130BP0DP73 79 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 DEFB130AP0DP74 79 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 MEOX2P50222 304 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 FGL1Q08830 312 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 SPINK13Q1W4C9 94 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 C15orf53Q8NAA6 179 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 TRGV9Q99603 122 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 MUC4Q99102 2169 aa13.66□□□□□ -0.22
UBXN4-202ENST00000415164 M0R2Z0 102 aa13.65□□□□□ -0.22
UBXN4-202ENST00000415164 ORM2P19652 201 aa13.65□□□□□ -0.22
UBXN4-202ENST00000415164 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
UBXN4-202ENST00000415164 F5H768 121 aa13.64□□□□□ -0.23
UBXN4-202ENST00000415164 INSP01308 110 aa13.64□□□□□ -0.23
UBXN4-202ENST00000415164 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
UBXN4-202ENST00000415164 SRPXP78539 464 aa13.64□□□□□ -0.23
UBXN4-202ENST00000415164 TNP2Q05952 138 aa13.64□□□□□ -0.23
UBXN4-202ENST00000415164 SPCS2Q15005 226 aa13.64□□□□□ -0.23
UBXN4-202ENST00000415164 ANKRD20A5PA0PJZ0 165 aa13.63□□□□□ -0.23
UBXN4-202ENST00000415164 GATA2P23769 480 aaPredicted RBP13.63□□□□□ -0.23
UBXN4-202ENST00000415164 CNN1P51911 297 aaKnown RBP13.63□□□□□ -0.23
UBXN4-202ENST00000415164 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.63□□□□□ -0.23
UBXN4-202ENST00000415164 TMED4Q7Z7H5 227 aa13.63□□□□□ -0.23
UBXN4-202ENST00000415164 OR1B1Q8NGR6 318 aa13.63□□□□□ -0.23
UBXN4-202ENST00000415164 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 ZNF98A6NK75 572 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 CTDSPLO15194 276 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 DUSP14O95147 198 aaKnown RBP13.62□□□□□ -0.23
UBXN4-202ENST00000415164 SMIM18P0DKX4 95 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 HTN1P15515 57 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 FCN2Q15485 313 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 GGNBP1Q5YKI7 109 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 RNF182Q8N6D2 247 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 OR11H7Q8NGC8 314 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 TMEM147Q9BVK8 224 aa13.62□□□□□ -0.23
UBXN4-202ENST00000415164 LRP1BQ9NZR2 4599 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 TRAV12-2A0A075B6T6 113 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 LYRM9A8MSI8 78 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 AKR1C1Q04828 323 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 AMTNQ6UX39 209 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 GPR141Q7Z602 305 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 ZNF738Q8NE65 137 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 PPP1R14DQ9NXH3 145 aa13.61□□□□□ -0.23
UBXN4-202ENST00000415164 NBDYA0A0U1RRE5 68 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms