RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 AIPO00170 330 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 BANF1O75531 89 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 EIF5AP63241 154 aaKnown RBP1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 SMIM21Q3B7S5 101 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 ZNF826PQ6ZT77 177 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 RPS19BP1Q86WX3 136 aaKnown RBP1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 THEM6Q8WUY1 208 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 MALSU1Q96EH3 234 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 ADAT3Q96EY9 351 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 SLC50A1Q9BRV3 221 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 TMEM70Q9BUB7 260 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 ASB4Q9Y574 426 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 NUBP2Q9Y5Y2 271 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 CR1P17927 2039 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 MED1Q15648 1581 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 DOCK4Q8N1I0 1966 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 TRAV1-1A0A0B4J248 108 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 IGKV1-9A0A0C4DH69 117 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 PFDN1O60925 122 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 SRP14P37108 136 aaKnown RBP1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 ZNF846Q147U1 533 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 LTC4SQ16873 150 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR8J3Q8NGG0 315 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 ZNF563Q8TA94 476 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 LZICQ8WZA0 190 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 CCDC115Q96NT0 180 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 RNF122Q9H9V4 155 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 EPDR1Q9UM22 224 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 RTTNQ86VV8 2226 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 FMN1Q68DA7 1419 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 UHRF1BP1Q6BDS2 1440 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 NUP210Q8TEM1 1887 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 MICAL3Q7RTP6 2002 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 FREM1Q5H8C1 2179 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 WDR7Q9Y4E6 1490 aa1.88□□□□□ -2.11
HMGB3P31-201ENST00000413333 EML6Q6ZMW3 1958 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 TRAV3A0A0B4J244 114 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 ARL5CA6NH57 179 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 RIIAD1A6NNX1 92 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 PIAS1O75925 651 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 GADD45GO95257 159 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 MGST1P10620 155 aaKnown RBP1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 RPS28P62857 69 aaKnown RBP1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 SPANXN5Q5MJ07 72 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 LRRC18Q8N456 261 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 NUP35Q8NFH5 326 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR9Q1Q8NGQ5 310 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 STAG3L4Q8TBR4 150 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 TSC22D3Q99576 134 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 CCDC32Q9BV29 185 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 MRPL32Q9BYC8 188 aaKnown RBP1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 IMUPQ9GZP8 106 aa1.87□□□□□ -2.11
HMGB3P31-201ENST00000413333 BAZ2BQ9UIF8 2168 aaKnown RBP1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 HEATR5BQ9P2D3 2071 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 ANAPC1Q9H1A4 1944 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 TECPR2O15040 1411 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 TRAV14DV4A0A0A6YYC5 116 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 A0A1B0GX51 115 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 F8W036 122 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 C19orf84I3L1E1 186 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 DEGS1O15121 323 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 APOA2P02652 100 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 RPL7P18124 248 aaKnown RBP1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 RPS3P23396 243 aaKnown RBP eCLIP1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 CKS1BP61024 79 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR8B8Q15620 311 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 RRN3P1Q2M238 152 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 SCGB2B2Q4G0G5 96 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 RNASE10Q5GAN6 216 aaKnown RBP1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 ANGPTL5Q86XS5 388 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 TPT1P8Q9HAU6 139 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 SPANXCQ9NY87 97 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 OBSL1O75147 1896 aa1.86□□□□□ -2.11
HMGB3P31-201ENST00000413333 TRAV36DV7A0A075B6V5 113 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 BORCS7-ASMTA0A0B4J1R7 106 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 C7orf71A4D174 169 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 J3KT08 172 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 K7EP13 123 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 ASAH2BP0C7U1 165 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 POLR2HP52434 150 aaKnown RBP1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 PFDN5Q99471 154 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 NAA38Q9BRA0 125 aaKnown RBP1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 RTL8AQ9BWD3 113 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 TMEM133Q9H2Q1 129 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 TAS2R4Q9NYW5 299 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 MED11Q9P086 117 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 SMARCA2P51531 1590 aa1.85□□□□□ -2.11
HMGB3P31-201ENST00000413333 FANCMQ8IYD8 2048 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 MYOFQ9NZM1 2061 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 ANKRD31Q8N7Z5 1873 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 RP1P56715 2156 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 TAX1BP3O14907 124 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 FAM107AO95990 144 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 PSG9Q00887 426 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 CDK5R1Q15078 307 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 BCL2L15Q5TBC7 163 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR2T10Q8NGZ9 312 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 SLAMF6Q96DU3 332 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 CARD19Q96LW7 228 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms