RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NDFIP1Q9BT67 221 aa13.3□□□□□ -0.28
LIMS2-208ENST00000410011 SSBP4Q9BWG4 385 aaPredicted RBP13.3□□□□□ -0.28
LIMS2-208ENST00000410011 IGHV3-72A0A0B4J1Y9 119 aa13.29□□□□□ -0.28
LIMS2-208ENST00000410011 A6NNC1 897 aa13.29□□□□□ -0.28
LIMS2-208ENST00000410011 GPR6P46095 362 aaPredicted RBP13.29□□□□□ -0.28
LIMS2-208ENST00000410011 TCF24Q7RTU0 167 aa13.29□□□□□ -0.28
LIMS2-208ENST00000410011 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
LIMS2-208ENST00000410011 RNF24Q9Y225 148 aa13.29□□□□□ -0.28
LIMS2-208ENST00000410011 APOBEC3AP31941 199 aaPredicted RBP13.29□□□□□ -0.28
LIMS2-208ENST00000410011 PRSS33Q8NF86 280 aa13.29□□□□□ -0.28
LIMS2-208ENST00000410011 OR2D3Q8NGH3 330 aa13.29□□□□□ -0.28
LIMS2-208ENST00000410011 B9A039 149 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 I3L2K1 104 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 PSG1P11464 419 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 RNASEKQ6P5S7 137 aaKnown RBP13.28□□□□□ -0.28
LIMS2-208ENST00000410011 CNTFRP26992 372 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 TSPOP30536 169 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 BATFQ16520 125 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 LCN12Q6JVE5 192 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 TMEM70Q9BUB7 260 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 SLC25A39Q9BZJ4 359 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-208ENST00000410011 PPP1R14DQ9NXH3 145 aa13.28□□□□□ -0.28
LIMS2-208ENST00000410011 CFAP47Q6ZTR5 3102 aa13.27□□□□□ -0.28
LIMS2-208ENST00000410011 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.28
LIMS2-208ENST00000410011 HAX1O00165 279 aa13.27□□□□□ -0.28
LIMS2-208ENST00000410011 GFRALQ6UXV0 394 aa13.27□□□□□ -0.28
LIMS2-208ENST00000410011 Q86TA4 180 aa13.27□□□□□ -0.28
LIMS2-208ENST00000410011 SGK494Q96LW2 274 aa13.27□□□□□ -0.28
LIMS2-208ENST00000410011 ARFGEF3Q5TH69 2177 aa13.27□□□□□ -0.29
LIMS2-208ENST00000410011 IGLV2-11P01706 119 aa13.27□□□□□ -0.29
LIMS2-208ENST00000410011 NPSP0C0P6 89 aa13.27□□□□□ -0.29
LIMS2-208ENST00000410011 FAM120AOSQ5T036 256 aa13.27□□□□□ -0.29
LIMS2-208ENST00000410011 ABHD17AQ96GS6 310 aa13.27□□□□□ -0.29
LIMS2-208ENST00000410011 OR5AL1P0C617 328 aa13.26□□□□□ -0.29
LIMS2-208ENST00000410011 LYPD1Q8N2G4 141 aa13.26□□□□□ -0.29
LIMS2-208ENST00000410011 Q8NA96 180 aa13.26□□□□□ -0.29
LIMS2-208ENST00000410011 SRSF12Q8WXF0 261 aaKnown RBP13.26□□□□□ -0.29
LIMS2-208ENST00000410011 RPH3ALQ9UNE2 315 aa13.26□□□□□ -0.29
LIMS2-208ENST00000410011 LY6LH3BQJ8 138 aa13.25□□□□□ -0.29
LIMS2-208ENST00000410011 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
LIMS2-208ENST00000410011 STPG4Q8N801 248 aa13.25□□□□□ -0.29
LIMS2-208ENST00000410011 PGLYRP4Q96LB8 373 aa13.25□□□□□ -0.29
LIMS2-208ENST00000410011 Q56UQ5 140 aa13.25□□□□□ -0.29
LIMS2-208ENST00000410011 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
LIMS2-208ENST00000410011 RASL11BQ9BPW5 248 aa13.25□□□□□ -0.29
LIMS2-208ENST00000410011 CNOT1A5YKK6 2376 aaKnown RBP13.24□□□□□ -0.29
LIMS2-208ENST00000410011 LOC102724200A0A096LPH7 203 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-208ENST00000410011 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 COL8A1P27658 744 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 LEMD1Q68G75 181 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 SCNM1Q9BWG6 230 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 ASPMQ8IZT6 3477 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 OVOL3O00110 214 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 IGKV1-17P01599 117 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 IGLL1P15814 213 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 LYZP61626 148 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 LHFPL4Q7Z7J7 247 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 TMEM75Q8N9X5 138 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 RPEQ96AT9 228 aa13.24□□□□□ -0.29
LIMS2-208ENST00000410011 IGHV3-21A0A0B4J1V1 117 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 MAJINQ3KP22 176 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 TRBV19A0A075B6N1 114 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 NDUFB8O95169 186 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 TFPI2P48307 235 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 BPIFA4PQ86YQ2 179 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 OR4F17Q8NGA8 305 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 GSX1Q9H4S2 264 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-208ENST00000410011 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
LIMS2-208ENST00000410011 PPIAL4CA0A0B4J2A2 164 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 A0A1B0GW15 77 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 SYS1-DBNDD2H3BUS1 97 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 CHEK1O14757 476 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 PPIAL4GP0DN37 164 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 LEPROTL1O95214 131 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 LIPFP07098 398 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 CD3EP07766 207 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 APELAP0DMC3 54 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 MUC15Q8N387 334 aa13.22□□□□□ -0.29
LIMS2-208ENST00000410011 ZNF318Q5VUA4 2279 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.29
LIMS2-208ENST00000410011 ZNF785A8K8V0 405 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 H3BRN7 92 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 H3BTX0 84 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 K7EIM0 57 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 CIARTQ8N365 385 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-208ENST00000410011 KIR3DL3Q8N743 410 aa13.21□□□□□ -0.29
LIMS2-208ENST00000410011 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.3
LIMS2-208ENST00000410011 K7EQM0 130 aa13.21□□□□□ -0.3
LIMS2-208ENST00000410011 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.3
LIMS2-208ENST00000410011 LY6G5BQ8NDX9 201 aa13.21□□□□□ -0.3
LIMS2-208ENST00000410011 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-208ENST00000410011 ZGRF1Q86YA3 2104 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 TRAV8-1A0A0A6YYK1 113 aa13.2□□□□□ -0.3
LIMS2-208ENST00000410011 OR4C46A6NHA9 309 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms