RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 NUDT3O95989 172 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 RD3LP0DJH9 198 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 PRSS3P35030 304 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 SPCS3P61009 180 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 C2orf83Q53S99 150 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 UBE2NLQ5JXB2 153 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 FAM78BQ5VT40 261 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 GPX8Q8TED1 209 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 ZNF486Q96H40 463 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-203ENST00000397378 IGF2BP2-AS1Q96M15 143 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 CNBD2Q96M20 576 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 TP53RKQ96S44 253 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 Q9H8V8 135 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 KLK11Q9UBX7 282 aa6.55□□□□□ -1.36
NEDD9-203ENST00000397378 A0A0J9YX75 114 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 SMIM31A0A1B0GVY4 71 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 F5H768 121 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 ISLRO14498 428 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 EREGO14944 169 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 NXPH3O95157 252 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 PSG1P11464 419 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 TSPOP30536 169 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 OR8G2PQ6IF36 304 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 ETFRF1Q6IPR1 90 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 EBLN2Q6P2I7 272 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 SSX7Q7RTT5 188 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 OR52E5Q8NH55 327 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 COQ8AQ8NI60 647 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 NPIPB3Q92617 1050 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
NEDD9-203ENST00000397378 TMEM208Q9BTX3 173 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 KRTAP1-5Q9BYS1 174 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 Q9H3A6 140 aa6.54□□□□□ -1.36
NEDD9-203ENST00000397378 A0A0G2JRQ6 117 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 LOC100506127A0A0U1RQW1 187 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 A0A1W2PPQ1 181 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 F6UB75 175 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 M0QYG6 137 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 ATP5G1P05496 136 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 PGAM2P15259 253 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 UCP1P25874 307 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 RCVRNP35243 200 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 ATP5G3P48201 142 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 PIGPP57054 158 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 CLINT1Q14677 625 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 SAMD13Q5VXD3 122 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 AMTNQ6UX39 209 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 SLC24A4Q8NFF2 622 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 RNF141Q8WVD5 230 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 RNF125Q96EQ8 232 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 ABHD1Q96SE0 405 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-203ENST00000397378 RPRMQ9NS64 109 aa6.53□□□□□ -1.36
NEDD9-203ENST00000397378 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 CBY3A6NI87 242 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-203ENST00000397378 HSBP1L1C9JCN9 74 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 PI3P19957 117 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 SUPT4H1P63272 117 aaKnown RBP6.52□□□□□ -1.37
NEDD9-203ENST00000397378 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 NOXA1Q86UR1 476 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 LHFPL1Q86WI0 220 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 FAM219AQ8IW50 185 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 SAMD12Q8N8I0 201 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 OR4C16Q8NGL9 310 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 TMEM170AQ8WVE7 144 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 GPR146Q96CH1 333 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 ACY3Q96HD9 319 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 UPK3BQ9BT76 320 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-203ENST00000397378 DOK5Q9P104 306 aa6.52□□□□□ -1.37
NEDD9-203ENST00000397378 CRXO43186 299 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-203ENST00000397378 PRM2P04554 102 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 MEOX2P50222 304 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 CNPY1Q3B7I2 92 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 SP6Q3SY56 376 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 IZUMO2Q6UXV1 221 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 RNASE11Q8TAA1 199 aaKnown RBP6.51□□□□□ -1.37
NEDD9-203ENST00000397378 DEFB104AQ8WTQ1 72 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 TRIM63Q969Q1 353 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 PBDC1Q9BVG4 233 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 RAB26Q9ULW5 256 aa6.51□□□□□ -1.37
NEDD9-203ENST00000397378 NOL3O60936 208 aaKnown RBP6.5□□□□□ -1.37
NEDD9-203ENST00000397378 INSP01308 110 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 PLA2G1BP04054 148 aaKnown RBP6.5□□□□□ -1.37
NEDD9-203ENST00000397378 ELK1P19419 428 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 ERVFC1-1P60608 527 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 FCN2Q15485 313 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 NMSQ5H8A3 153 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 Q6ZRN7 208 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-203ENST00000397378 GPR141Q7Z602 305 aa6.5□□□□□ -1.37
NEDD9-203ENST00000397378 LINC00518Q8N0U6 118 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms