RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 TRBV20OR9-2A0A075B6H5 130 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 SCO2A0A1W2PP80 73 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 C9JCJ5 164 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 FABP1P07148 127 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
SCAF11-204ENST00000395454 SRSF2Q01130 221 aaKnown RBP11.81□□□□□ -0.52
SCAF11-204ENST00000395454 C16orf82Q7Z2V1 217 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 LINC00305Q7Z4B0 112 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 LINC01551Q86U37 167 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 FXYD5Q96DB9 178 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 UHRF2Q96PU4 802 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
SCAF11-204ENST00000395454 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 FAM181BA6NEQ2 426 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 GGTLC3B5MD39 225 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 HYPMO75409 117 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 PSG1P11464 419 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 KIAA0141Q14154 515 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 ZNF343Q6P1L6 599 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 C5orf56Q8N8D9 126 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 FAM110DQ8TAY7 271 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 RASL11BQ9BPW5 248 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 HSPB9Q9BQS6 159 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 TCEAL7Q9BRU2 100 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 TRAV30A0A087WSZ9 112 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 F8W735 103 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 RNASE1P07998 156 aaKnown RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
SCAF11-204ENST00000395454 ADIRFQ15847 76 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 PAXXQ9BUH6 204 aa11.8□□□□□ -0.52
SCAF11-204ENST00000395454 C2CD3Q4AC94 2353 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 M0QZK8 103 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 TOMM40O96008 361 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 HIST1H1BP16401 226 aaKnown RBP11.79□□□□□ -0.52
SCAF11-204ENST00000395454 MYCNOSP40205 109 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 BLCAPP62952 87 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 C2CD4CQ8TF44 421 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 Q8WTZ3 238 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 ANAPC16Q96DE5 110 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 OR51M1Q9H341 326 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 THYN1Q9P016 225 aa11.79□□□□□ -0.52
SCAF11-204ENST00000395454 MRPL27Q9P0M9 148 aaKnown RBP11.79□□□□□ -0.52
SCAF11-204ENST00000395454 AMY1AP04745 511 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 OR10J4P0C629 311 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 TIGITQ495A1 244 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 LURAP1LQ8IV03 231 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 OR1B1Q8NGR6 318 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 TRBV24-1A0A075B6N3 115 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 GP9P14770 177 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 ORM2P19652 201 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 C19orf54Q5BKX5 351 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 C9orf152Q5JTZ5 239 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 TMEM190Q8WZ59 177 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 TXN2Q99757 166 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 TMEM14CQ9P0S9 112 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 MLXQ9UH92 298 aa11.78□□□□□ -0.52
SCAF11-204ENST00000395454 RD3LP0DJH9 198 aa11.77□□□□□ -0.53
SCAF11-204ENST00000395454 MFAP4P55083 255 aa11.77□□□□□ -0.53
SCAF11-204ENST00000395454 PYGO2Q9BRQ0 406 aa11.77□□□□□ -0.53
SCAF11-204ENST00000395454 HIGD1AQ9Y241 93 aa11.77□□□□□ -0.53
SCAF11-204ENST00000395454 TRBV9A0A0B4J1U6 114 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 PYYP10082 97 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 C21orf62Q9NYP8 219 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 ATRQ13535 2644 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
SCAF11-204ENST00000395454 CXCL1P09341 107 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 RPL35P42766 123 aaKnown RBP11.76□□□□□ -0.53
SCAF11-204ENST00000395454 Q6ZS46 218 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF491Q8N8L2 437 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
SCAF11-204ENST00000395454 SLC25A39Q9BZJ4 359 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-204ENST00000395454 H7BYZ3 331 aa11.75□□□□□ -0.53
SCAF11-204ENST00000395454 NDUFB8O95169 186 aa11.75□□□□□ -0.53
SCAF11-204ENST00000395454 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
SCAF11-204ENST00000395454 PPP1R2P9O14990 202 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 CRYBB3P26998 211 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 RAB5BP61020 215 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 LYZP61626 148 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 SUMO1P63165 101 aaKnown RBP11.74□□□□□ -0.53
SCAF11-204ENST00000395454 ZNF329Q86UD4 541 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 PRIMA1Q86XR5 153 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 IMMP2LQ96T52 175 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 SHANK2-AS3Q9BTD1 123 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 C1orf196B1AJZ1 125 aa11.74□□□□□ -0.53
SCAF11-204ENST00000395454 H3BRN7 92 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms