RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PAX2Q02962 417 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 E9PLN8 166 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 CKS1BP61024 79 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 OR13C6PQ8NH95 151 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 CADP27708 2225 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 LYPD1Q8N2G4 141 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 LYPD6BQ8NI32 183 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 CST9LQ9H4G1 147 aa14.14□□□□□ -0.15
SIN3A-203ENST00000394949 IGHV3-66A0A0C4DH42 116 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 TDGF1P13385 188 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 C7orf69Q9H7B7 122 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 IGHV3-49A0A0A0MS15 119 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 RNF182Q8N6D2 247 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.13□□□□□ -0.15
SIN3A-203ENST00000394949 FAM231BA6NCW3 169 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 TOMM40O96008 361 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 CDKN1AP38936 164 aa14.13□□□□□ -0.15
SIN3A-203ENST00000394949 LINC00473A8K010 186 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 RHOGP84095 191 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 SFTA2Q6UW10 78 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 DLX4Q92988 240 aaPredicted RBP14.12□□□□□ -0.15
SIN3A-203ENST00000394949 ERG28Q9UKR5 140 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 GTSCR1Q86UQ5 136 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 NAA38Q9BRA0 125 aaKnown RBP14.12□□□□□ -0.15
SIN3A-203ENST00000394949 MPDZO75970 2070 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.12□□□□□ -0.15
SIN3A-203ENST00000394949 SMAD7O15105 426 aaKnown RBP14.12□□□□□ -0.15
SIN3A-203ENST00000394949 PF4P02776 101 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 CLEC19AQ6UXS0 136 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 C18orf32Q8TCD1 76 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 VOPP1Q96AW1 172 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 JMJD8Q96S16 334 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 LYZL1Q6UWQ5 148 aa14.12□□□□□ -0.15
SIN3A-203ENST00000394949 RSPO3Q9BXY4 272 aaPredicted RBP14.12□□□□□ -0.15
SIN3A-203ENST00000394949 PAX9P55771 341 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 ZNF581Q9P0T4 197 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 PKDREJQ9NTG1 2253 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 TFF1P04155 84 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 RNASE1P07998 156 aaKnown RBP14.11□□□□□ -0.15
SIN3A-203ENST00000394949 EVI2AP22794 236 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 RNASE4P34096 147 aaKnown RBP14.11□□□□□ -0.15
SIN3A-203ENST00000394949 PLAURQ03405 335 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 TRAV3A0A0B4J244 114 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 IL15RAQ13261 267 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 CT83Q5H943 113 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 DMRTC2Q8IXT2 367 aaPredicted RBP14.11□□□□□ -0.15
SIN3A-203ENST00000394949 MYO7BQ6PIF6 2116 aa14.11□□□□□ -0.15
SIN3A-203ENST00000394949 PSMB11A5LHX3 300 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 NPSP0C0P6 89 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 CNTFRP26992 372 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 TMEM95Q3KNT9 176 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 NOTCH3Q9UM47 2321 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 IGHV1-18A0A0C4DH31 117 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 A0A1B0GWJ7 208 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 IGHV4-39P01824 125 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 GTSF1LQ9H1H1 148 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 LIME1Q9H400 295 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 PMS2P5A8MQ11 134 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 RNF5Q99942 180 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 SPANXA1Q9NS26 97 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 NPIPB5A8MRT5 1133 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 TMEM238C9JI98 176 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 Q6ZWC4 215 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 ZNF492Q9P255 531 aa14.1□□□□□ -0.15
SIN3A-203ENST00000394949 ZSWIM8A7E2V4 1837 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 MBNL3Q9NUK0 354 aaKnown RBP14.09□□□□□ -0.15
SIN3A-203ENST00000394949 FOXG1P55316 489 aaPredicted RBP14.09□□□□□ -0.15
SIN3A-203ENST00000394949 ZNF329Q86UD4 541 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 SPRR3Q9UBC9 169 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 TRAV2A0A0B4J234 112 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 PINLYPA6NC86 204 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 IL18BPO95998 194 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 NUP37Q8NFH4 326 aa14.09□□□□□ -0.15
SIN3A-203ENST00000394949 RBMY1BA6NDE4 496 aaKnown RBP14.08□□□□□ -0.15
SIN3A-203ENST00000394949 RBMY1EA6NEQ0 496 aaKnown RBP14.08□□□□□ -0.15
SIN3A-203ENST00000394949 RBMY1DP0C7P1 496 aaKnown RBP14.08□□□□□ -0.15
SIN3A-203ENST00000394949 RBMY1A1P0DJD3 496 aaKnown RBP14.08□□□□□ -0.15
SIN3A-203ENST00000394949 RBMY1CP0DJD4 496 aa14.08□□□□□ -0.15
SIN3A-203ENST00000394949 ATXN8Q156A1 80 aa14.08□□□□□ -0.15
SIN3A-203ENST00000394949 SPACA3Q8IXA5 215 aa14.08□□□□□ -0.15
SIN3A-203ENST00000394949 EXOC3-AS1Q8N2X6 119 aa14.08□□□□□ -0.15
SIN3A-203ENST00000394949 ETV2O00321 342 aaPredicted RBP14.08□□□□□ -0.16
SIN3A-203ENST00000394949 ZNF726P1Q15940 193 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 C5orf24Q7Z6I8 188 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 CD177Q8N6Q3 437 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 IGKV1-6A0A0C4DH72 117 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 OVOL1O14753 267 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 IGKV3-20P01619 116 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 TEX43Q6ZNM6 134 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 NCOR1P1Q9H4R4 102 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 TRBV7-9A0A0J9YWB2 115 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 PSG3Q16557 428 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 SCRT1Q9BWW7 348 aa14.08□□□□□ -0.16
SIN3A-203ENST00000394949 ATRXP46100 2492 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 NCR2O95944 276 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 CD300EQ496F6 205 aaPredicted RBP14.07□□□□□ -0.16
SIN3A-203ENST00000394949 C10orf55Q5SWW7 151 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 IGHV3OR16-8A0A075B7F1 116 aa14.07□□□□□ -0.16
SIN3A-203ENST00000394949 CHAC1Q9BUX1 264 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms