RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 IGKV3D-20A0A0C4DH25 116 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 COX8AP10176 69 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 IGHV3OR16-8A0A075B7F1 116 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 MALP21145 153 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 ZNF138P52744 262 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 NEGR1Q7Z3B1 354 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 ITLN2Q8WWU7 325 aaPredicted RBP14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 RASL10AQ92737 203 aa14.01□□□□□ -0.17
COL4A3BP-203ENST00000380494 EFNA2O43921 213 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 STPG1Q5TH74 334 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 TMEM75Q8N9X5 138 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 SPANXCQ9NY87 97 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 A0A0G2JRQ6 117 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 PLAURQ03405 335 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 ATP1A1-AS1Q5TC04 95 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
COL4A3BP-203ENST00000380494 IGHV1-18A0A0C4DH31 117 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 ZNF883P0CG24 379 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 ABHD17AQ96GS6 310 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 MYO9BQ13459 2157 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 HIST1H4AP62805 103 aaKnown RBP14□□□□□ -0.17
COL4A3BP-203ENST00000380494 C9orf106Q8NAJ2 232 aa14□□□□□ -0.17
COL4A3BP-203ENST00000380494 TRAV3A0A0B4J244 114 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 FDCSPQ8NFU4 85 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 IGHV3-64A0A075B6Q5 118 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 SMIM27A0A1W2PRY6 76 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 TMEM8BA6NDV4 472 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 C9JAW5 83 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 H3BMM0 161 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 PAX8Q06710 450 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 FAM231DQ6ZW35 169 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 UBE2WQ96B02 151 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 IGHV1-24A0A0C4DH33 117 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 SIVA1O15304 175 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 C9orf153Q5TBE3 101 aa13.99□□□□□ -0.17
COL4A3BP-203ENST00000380494 LINC00473A8K010 186 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 ADARB2-AS1A8MUL3 147 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 TFF1P04155 84 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 TAL2Q16559 108 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 GGNQ86UU5 652 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 LINC00477Q96M19 166 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 PDE6HQ13956 83 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 GLMPQ8WWB7 406 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 DNAJC30Q96LL9 226 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 H0YJW9 148 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 PSPNO60542 156 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
COL4A3BP-203ENST00000380494 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 TRGV2A0A075B6R0 118 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 FHL1Q13642 323 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 LGALS9BQ3B8N2 356 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 LGALS9CQ6DKI2 356 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 CCL19Q99731 98 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 SRSF8Q9BRL6 282 aaKnown RBP13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 MYMXA0A1B0GTQ4 84 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 FXYD7P58549 80 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 A0A1W2PPM0 123 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 AMN1Q8IY45 258 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 PRSS46E5RG02 174 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 Q6ZRM9 215 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 TIMM23O14925 209 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 LINC00158P58513 81 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 BOD1L2Q8IYS8 172 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 CD177Q8N6Q3 437 aa13.97□□□□□ -0.17
COL4A3BP-203ENST00000380494 RNASE2P10153 161 aaKnown RBP13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 STPG4Q8N801 248 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 CSTL1Q9H114 145 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 V9GYV3 84 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 HAX1O00165 279 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 LEPROTO15243 131 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 COX6B1P14854 86 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 RNF144BQ7Z419 303 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 LINC01560Q8TB33 94 aa13.96□□□□□ -0.17
COL4A3BP-203ENST00000380494 IGHV3OR16-10A0A075B7F0 116 aa13.96□□□□□ -0.18
COL4A3BP-203ENST00000380494 IGHV1-46P01743 117 aa13.96□□□□□ -0.18
COL4A3BP-203ENST00000380494 ATP5J2P56134 94 aa13.96□□□□□ -0.18
COL4A3BP-203ENST00000380494 SLAQ13239 276 aa13.96□□□□□ -0.18
COL4A3BP-203ENST00000380494 OR11H6Q8NGC7 330 aa13.96□□□□□ -0.18
COL4A3BP-203ENST00000380494 LYPD6BQ8NI32 183 aa13.96□□□□□ -0.18
COL4A3BP-203ENST00000380494 A0A1B0GUS0 222 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 VDAC2P45880 294 aaPredicted RBP13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 ZNF726P1Q15940 193 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 TNS1Q9HBL0 1735 aaKnown RBP13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 IFITM1P13164 125 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 TMEM141Q96I45 108 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 TRAV8-3A0A0A6YYJ7 113 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 TRAV40A0A0B4J280 105 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 GAGE12HA6NDE8 117 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 BVES-AS1Q5T3Y7 98 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 Q8N8P6 123 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 TIMM21Q9BVV7 248 aa13.95□□□□□ -0.18
COL4A3BP-203ENST00000380494 LCTP09848 1927 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 IGLL1P15814 213 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 OOSP1A8MZH6 123 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 INAFM2P0DMQ5 153 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 GATD1Q8NB37 220 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 C10orf55Q5SWW7 151 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 COLCA1Q6ZS62 124 aa13.94□□□□□ -0.18
COL4A3BP-203ENST00000380494 VWCEQ96DN2 955 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms