RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 CTSZQ9UBR2 303 aa17.12■□□□□ 0.33
SKI-201ENST00000378536 CD5P06127 495 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 PSMG4Q5JS54 123 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 PCDH15Q96QU1 1955 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 SAP30O75446 220 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 FAM110DQ8TAY7 271 aaPredicted RBP17.11■□□□□ 0.33
SKI-201ENST00000378536 IZUMO1RA6ND01 250 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 VAMP3Q15836 100 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 MLANAQ16655 118 aa17.11■□□□□ 0.33
SKI-201ENST00000378536 TRAV21A0A0B4J279 112 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 OR10AG1Q8NH19 301 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 YLPM1P49750 1951 aaKnown RBP17.1■□□□□ 0.33
SKI-201ENST00000378536 PRORYQ9H606 182 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 KLHL30-AS1Q8NEE0 82 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 RFNGQ9Y644 331 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 HIGD1CA8MV81 97 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 AP5S1Q9NUS5 200 aa17.1■□□□□ 0.33
SKI-201ENST00000378536 C22orf46C9J442 243 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 PEF1Q9UBV8 284 aaKnown RBP17.09■□□□□ 0.33
SKI-201ENST00000378536 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 GTSCR1Q86UQ5 136 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 IGKV1-39P01597 117 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 IGKV1D-39P04432 117 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 CD7P09564 240 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 SCGB1C2P0DMR2 95 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
SKI-201ENST00000378536 PPP1R17O96001 155 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 FOXA3P55318 350 aaPredicted RBP17.09■□□□□ 0.33
SKI-201ENST00000378536 OSTCQ9NRP0 149 aa17.09■□□□□ 0.33
SKI-201ENST00000378536 CADP27708 2225 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 NDPQ00604 133 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 PRELID3AQ96N28 172 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 C19orf54Q5BKX5 351 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 C1orf122Q6ZSJ8 110 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 OCC1Q8TAD7 63 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 AGMATQ9BSE5 352 aa17.08■□□□□ 0.33
SKI-201ENST00000378536 IFITM10A6NMD0 228 aa17.08■□□□□ 0.32
SKI-201ENST00000378536 TMEM136Q6ZRR5 245 aa17.08■□□□□ 0.32
SKI-201ENST00000378536 LCNL1Q6ZST4 164 aa17.08■□□□□ 0.32
SKI-201ENST00000378536 PAM16Q9Y3D7 125 aa17.08■□□□□ 0.32
SKI-201ENST00000378536 EXOC3-AS1Q8N2X6 119 aa17.08■□□□□ 0.32
SKI-201ENST00000378536 SELENOKQ9Y6D0 94 aa17.07■□□□□ 0.32
SKI-201ENST00000378536 CMC4P56277 68 aaPredicted RBP17.07■□□□□ 0.32
SKI-201ENST00000378536 CD33P20138 364 aa17.07■□□□□ 0.32
SKI-201ENST00000378536 TNFRSF18Q9Y5U5 241 aa17.07■□□□□ 0.32
SKI-201ENST00000378536 DIAPH2-AS1Q14236 149 aa17.07■□□□□ 0.32
SKI-201ENST00000378536 KLK15Q9H2R5 256 aa17.07■□□□□ 0.32
SKI-201ENST00000378536 PGPEP1LA6NFU8 196 aa17.06■□□□□ 0.32
SKI-201ENST00000378536 M0R143 59 aa17.06■□□□□ 0.32
SKI-201ENST00000378536 C8orf31Q8N9H6 132 aa17.06■□□□□ 0.32
SKI-201ENST00000378536 ZNF502Q8TBZ5 544 aa17.06■□□□□ 0.32
SKI-201ENST00000378536 REC114Q7Z4M0 266 aa17.06■□□□□ 0.32
SKI-201ENST00000378536 C9orf139Q6ZV77 190 aa17.06■□□□□ 0.32
SKI-201ENST00000378536 IGKV2-40A0A087WW87 121 aaPredicted RBP17.05■□□□□ 0.32
SKI-201ENST00000378536 A0A1B0GW64 132 aa17.05■□□□□ 0.32
SKI-201ENST00000378536 IGKV2D-40P01614 121 aaPredicted RBP17.05■□□□□ 0.32
SKI-201ENST00000378536 DAZAP2Q15038 168 aaPredicted RBP17.05■□□□□ 0.32
SKI-201ENST00000378536 FBXL19-AS1Q494R0 122 aa17.05■□□□□ 0.32
SKI-201ENST00000378536 FBLN7Q53RD9 439 aa17.05■□□□□ 0.32
SKI-201ENST00000378536 OTOGLQ3ZCN5 2332 aa17.05■□□□□ 0.32
SKI-201ENST00000378536 EMP1P54849 157 aa17.05■□□□□ 0.32
SKI-201ENST00000378536 SRSF9Q13242 221 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■□□ 15.2
SKI-201ENST00000378536 IMMP2LQ96T52 175 aa17.05■□□□□ 0.32
SKI-201ENST00000378536 NMUP48645 174 aa17.04■□□□□ 0.32
SKI-201ENST00000378536 DEFB113Q30KQ7 82 aa17.04■□□□□ 0.32
SKI-201ENST00000378536 HOXB4P17483 251 aaPredicted RBP17.04■□□□□ 0.32
SKI-201ENST00000378536 TRGV2A0A075B6R0 118 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 ATRAIDQ6UW56 229 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 OR1N2Q8NGR9 330 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 DAZ1Q9NQZ3 744 aaKnown RBP17.03■□□□□ 0.32
SKI-201ENST00000378536 TCRAP04437 139 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 SPOCK3Q9BQ16 436 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 G3V318 75 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 NDUFB8O95169 186 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 FOLR2P14207 255 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 RHPN1-AS1Q9BWJ2 59 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 RNF114Q9Y508 228 aa17.03■□□□□ 0.32
SKI-201ENST00000378536 TMEM50AO95807 157 aa17.02■□□□□ 0.32
SKI-201ENST00000378536 PMCHL1Q16048 86 aa17.02■□□□□ 0.32
SKI-201ENST00000378536 OVOL3O00110 214 aa17.02■□□□□ 0.32
SKI-201ENST00000378536 PRB4P10163 310 aaPredicted RBP17.02■□□□□ 0.32
SKI-201ENST00000378536 TPSG1Q9NRR2 321 aa17.02■□□□□ 0.32
SKI-201ENST00000378536 WFDC12Q8WWY7 111 aa17.02■□□□□ 0.32
SKI-201ENST00000378536 TCTAP57738 103 aa17.02■□□□□ 0.31
SKI-201ENST00000378536 GPR61Q9BZJ8 451 aa17.02■□□□□ 0.31
SKI-201ENST00000378536 MED13Q9UHV7 2174 aa17.02■□□□□ 0.31
SKI-201ENST00000378536 CDX1P47902 265 aaPredicted RBP17.02■□□□□ 0.31
SKI-201ENST00000378536 PAPPA-AS1Q5QFB9 102 aa17.02■□□□□ 0.31
SKI-201ENST00000378536 PAX9P55771 341 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 LYPD1Q8N2G4 141 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 SHANK2-AS3Q9BTD1 123 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 TRGV11A0A075B6L2 103 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 IGHV4-39P01824 125 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 ZNF688P0C7X2 276 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 ORMDL3Q8N138 153 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 M0R3E3 92 aa17.01■□□□□ 0.31
SKI-201ENST00000378536 ZNF324O75467 553 aaPredicted RBP17.01■□□□□ 0.31
SKI-201ENST00000378536 A0A087X0M5 115 aa17■□□□□ 0.31
SKI-201ENST00000378536 A0A1B0GX30 115 aa17■□□□□ 0.31
SKI-201ENST00000378536 NPIPB5A8MRT5 1133 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms