RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C7orf69Q9H7B7 122 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 SCRT2Q9NQ03 307 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 ADGRG4Q8IZF6 3080 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 GAGE12BA1L429 117 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 DLL1O00548 723 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 CACNG8Q8WXS5 425 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 FLYWCH2Q96CP2 140 aaKnown RBP13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 MCRIP2Q9BUT9 160 aaKnown RBP13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 DMXL2Q8TDJ6 3036 aa13.35□□□□□ -0.27
PCDHA1-201ENST00000378133 C22orf46C9J442 243 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 H0Y8G0 127 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 CD5LO43866 347 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 FCN3O75636 299 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 TMEM30BQ3MIR4 351 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 ZNF714Q96N38 554 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 A0A087X0K7 114 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 TMEM200BQ69YZ2 307 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 PRSS57Q6UWY2 283 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 IGFL3Q6UXB1 125 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 Q6ZS92 163 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 OR5AN1Q8NGI8 311 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 MAP1LC3CQ9BXW4 147 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 ZGRF1Q86YA3 2104 aa13.34□□□□□ -0.27
PCDHA1-201ENST00000378133 WT1-ASQ06250 92 aa13.33□□□□□ -0.27
PCDHA1-201ENST00000378133 OR1L4Q8NGR5 311 aa13.33□□□□□ -0.27
PCDHA1-201ENST00000378133 NPIPB3Q92617 1050 aa13.33□□□□□ -0.27
PCDHA1-201ENST00000378133 PGLYRP4Q96LB8 373 aa13.33□□□□□ -0.27
PCDHA1-201ENST00000378133 H1FXQ92522 213 aaKnown RBP13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 FXYD5Q96DB9 178 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 EPDR1Q9UM22 224 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 AKAP13Q12802 2813 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 CGB1A6NKQ9 187 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 A8MWL6 223 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 SLC25A5P05141 298 aaKnown RBP13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 LIPFP07098 398 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 ZNF137PP52743 207 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 PATE2Q6UY27 113 aa13.33□□□□□ -0.28
PCDHA1-201ENST00000378133 TRAV8-6A0A0B4J262 113 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 HIST1H1AQ02539 215 aaPredicted RBP13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 TMEM177Q53S58 311 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 PET117Q6UWS5 81 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 OR10X1Q8NGY0 326 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 GPR82Q96P67 336 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 C17orf100A8MU93 164 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 PLAUP00749 431 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 OR5AL1P0C617 328 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 ZNF138P52744 262 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 FAM71F2Q6NXP2 309 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 LINC00322Q6ZN03 302 aaPredicted RBP13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 RBMXL3Q8N7X1 1067 aaKnown RBP13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 OR4C13Q8NGP0 309 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 BLNKQ8WV28 456 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 GTSF1Q8WW33 167 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 MS4A6AQ9H2W1 248 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 PEF1Q9UBV8 284 aaKnown RBP13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 ZNF835Q9Y2P0 537 aa13.32□□□□□ -0.28
PCDHA1-201ENST00000378133 A6NJY4 79 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 HLA-DRB1P01911 266 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 MEF2CQ06413 473 aaPredicted RBP13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 ADIPOQQ15848 244 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 PDPNQ86YL7 162 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 NUP37Q8NFH4 326 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 CCL17Q92583 94 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 ATMQ13315 3056 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 ABCA1O95477 2261 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 PGPA6NDG6 321 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 MOSP00540 346 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 P01737 135 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 GPR183P32249 361 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 TMEM167AQ8TBQ9 72 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 PMCHL2Q9BQD1 86 aa13.31□□□□□ -0.28
PCDHA1-201ENST00000378133 LYPD2Q6UXB3 125 aa13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 LINC00305Q7Z4B0 112 aa13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 SOX21Q9Y651 276 aaPredicted RBP13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 KALRNO60229 2985 aa13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 CHEK1O14757 476 aa13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 MYCNOSP40205 109 aa13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 PRSS22Q9GZN4 317 aa13.3□□□□□ -0.28
PCDHA1-201ENST00000378133 IGKV1D-37A0A075B6S9 117 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 PPIAL4EA0A075B759 164 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 PPIAL4DF5H284 164 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 PPIAL4FP0DN26 164 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 LGALS7P47929 136 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 RITA1Q96K30 269 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 MLST8Q9BVC4 326 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 HSPB8Q9UJY1 196 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 KLF12Q9Y4X4 402 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 TCRBV4S1A1TA0A5B7 111 aa13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 RBPMS2Q6ZRY4 209 aaKnown RBP13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
PCDHA1-201ENST00000378133 ZC2HC1AQ96GY0 325 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms