RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 PRSS57Q6UWY2 283 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 DDB2Q92466 427 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 Q9H3A6 140 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 ZNF257Q9Y2Q1 563 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 FAM208BQ5VWN6 2430 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 C9JCJ5 164 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 NCR2O95944 276 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 OR5AL1P0C617 328 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 HIST1H1EP10412 219 aaKnown RBP9.5□□□□□ -0.89
MCF2L-202ENST00000375597 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 POLQO75417 2590 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 F2RL2O00254 374 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 MT-ND6P03923 174 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 NHLH1Q02575 133 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 ZFP30Q9Y2G7 519 aa9.5□□□□□ -0.89
MCF2L-202ENST00000375597 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 ZNF891A8MT65 544 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 H0YJW9 148 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 PSG1P11464 419 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 FCGR2BP31994 310 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 PRR30Q53SZ7 412 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 TMEM70Q9BUB7 260 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 TNRC6BQ9UPQ9 1833 aaKnown RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 INSIG2Q9Y5U4 225 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 PPIAL4EA0A075B759 164 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 A0A1W2PRE2 83 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 NCBP2LA6PVI3 153 aaKnown RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 PPIAL4FP0DN26 164 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 NMUP48645 174 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 AMMECR1LQ6DCA0 310 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 Q8N976 141 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 Q8TAT8 98 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 CHRDL1Q9BU40 450 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 EPDR1Q9UM22 224 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 FAM90A27PA6NNH2 459 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 C22orf46C9J442 243 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 SPRY2O43597 315 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 Q0VG73 95 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 FOXE3Q13461 319 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 VMA21Q3ZAQ7 101 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 LRRC10Q5BKY1 277 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 DNLZQ5SXM8 178 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 BCL6BQ8N143 479 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-202ENST00000375597 GAL3ST2Q9H3Q3 398 aa9.49□□□□□ -0.89
MCF2L-202ENST00000375597 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 TNFRSF1AP19438 455 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 RPL27AP46776 148 aaKnown RBP9.48□□□□□ -0.89
MCF2L-202ENST00000375597 HBBP68871 147 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 PNKDQ8N490 385 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 TRGV8A0A0C4DH27 118 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 APOHP02749 345 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-202ENST00000375597 ARMS2P0C7Q2 107 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 CFHR2P36980 270 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 ARF6P62330 175 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 MBNL2Q5VZF2 373 aaKnown RBP9.48□□□□□ -0.89
MCF2L-202ENST00000375597 OR4C13Q8NGP0 309 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 ADTRPQ96IZ2 230 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 TXNDC17Q9BRA2 123 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 PLSCR4Q9NRQ2 329 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 FAM215AQ9Y5M1 114 aa9.48□□□□□ -0.89
MCF2L-202ENST00000375597 RIPPLY3P57055 190 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 TMEM108Q6UXF1 575 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 GTSF1Q8WW33 167 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 AP1S3Q96PC3 154 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 A0A1B0GWJ7 208 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 ZNF207O43670 478 aaKnown RBP9.47□□□□□ -0.89
MCF2L-202ENST00000375597 PAX1P15863 534 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 PTPRBP23467 1997 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 MYO9AB2RTY4 2548 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 FBLN7Q53RD9 439 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 SLC25A48Q6ZT89 311 aaKnown RBP9.47□□□□□ -0.89
MCF2L-202ENST00000375597 RPEQ96AT9 228 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 FXYD5Q96DB9 178 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 PERPQ96FX8 193 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 GRAMD2BQ96HH9 432 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 IGF2BP2-AS1Q96M15 143 aa9.47□□□□□ -0.89
MCF2L-202ENST00000375597 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
MCF2L-202ENST00000375597 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.89
MCF2L-202ENST00000375597 IL4P05112 153 aa9.46□□□□□ -0.89
MCF2L-202ENST00000375597 KLRD1Q13241 179 aa9.46□□□□□ -0.89
MCF2L-202ENST00000375597 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.89
MCF2L-202ENST00000375597 TTTY13Q9BZ97 58 aa9.46□□□□□ -0.89
MCF2L-202ENST00000375597 SONP18583 2426 aaKnown RBP9.46□□□□□ -0.89
MCF2L-202ENST00000375597 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
MCF2L-202ENST00000375597 FCER1GP30273 86 aa9.46□□□□□ -0.9
MCF2L-202ENST00000375597 ZNF788Q6ZQV5 615 aa9.46□□□□□ -0.9
MCF2L-202ENST00000375597 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.9
MCF2L-202ENST00000375597 TMEM213A2RRL7 107 aa9.46□□□□□ -0.9
MCF2L-202ENST00000375597 A8MWL6 223 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms