RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CR1LQ2VPA4 569 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 GEMIN7Q9H840 131 aaKnown RBP16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 LOC400499M0QZD8 3231 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 CD69Q07108 199 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 LGALS9BQ3B8N2 356 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 LGALS9CQ6DKI2 356 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 SPRY4Q9C004 299 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 JPT1Q9UK76 154 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 FAM186AA6NE01 2351 aa16.56■□□□□ 0.24
TMEFF1-201ENST00000374879 IFI27P40305 119 aaPredicted RBP16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 PRCDQ00LT1 54 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 ATP5G2Q06055 141 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 BCL6BQ8N143 479 aaPredicted RBP16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 LOXL3P58215 753 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 FXYD7P58549 80 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 ETDBQ3ZM63 59 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 CD177Q8N6Q3 437 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 MRAP2Q96G30 205 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 ZNF714Q96N38 554 aa16.55■□□□□ 0.24
TMEFF1-201ENST00000374879 C19orf67A6NJJ6 358 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 C2orf83Q53S99 150 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 PDPNQ86YL7 162 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 C12orf49Q9H741 205 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 ZNF492Q9P255 531 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 URB1O60287 2271 aaKnown RBP16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 FSTL3O95633 263 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 RNASE2P10153 161 aaKnown RBP16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 TBC1D28Q2M2D7 210 aa16.54■□□□□ 0.24
TMEFF1-201ENST00000374879 TANC2Q9HCD6 1990 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 OVOL3O00110 214 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 LTAP01374 205 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 RPRMLQ8N4K4 120 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 GCSAMQ8N6F7 178 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 ARPC1AQ92747 370 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 FER1L6-AS2Q96M78 137 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 LOC389332A0A1B0GUA5 103 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 F8W1H4 67 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 MPV17P39210 176 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 PRNDQ9UKY0 176 aa16.53■□□□□ 0.24
TMEFF1-201ENST00000374879 IGHV3-48P01763 117 aa16.52■□□□□ 0.24
TMEFF1-201ENST00000374879 PHLDA1Q8WV24 401 aaPredicted RBP16.52■□□□□ 0.24
TMEFF1-201ENST00000374879 IQCF6A8MYZ5 107 aa16.52■□□□□ 0.23
TMEFF1-201ENST00000374879 COL8A1P27658 744 aa16.52■□□□□ 0.23
TMEFF1-201ENST00000374879 INSL3P51460 131 aa16.52■□□□□ 0.23
TMEFF1-201ENST00000374879 A0A1W2PRD5 423 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 A0A1W2PRF3 423 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 A0A1W2PRM7 423 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 ARMS2P0C7Q2 107 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 Q71RC1 249 aaPredicted RBP16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 OR5AN1Q8NGI8 311 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 A0A1W2PNU3 283 aaPredicted RBP16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 K7EMI3 77 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 SAA2P0DJI9 122 aaPredicted RBP16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 LINC00305Q7Z4B0 112 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 MED13Q9UHV7 2174 aa16.51■□□□□ 0.23
TMEFF1-201ENST00000374879 CIARTQ8N365 385 aaPredicted RBP16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 OR1L4Q8NGR5 311 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 HEATR1Q9H583 2144 aaKnown RBP16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 ZFHX4Q86UP3 3567 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 KBTBD11-OT1A0A1B0GTJ5 212 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 NPIPB6E9PJ23 425 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 H3BTX0 84 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 UPK2O00526 184 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 FMC1Q96HJ9 113 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 TTTY13Q9BZ97 58 aa16.5■□□□□ 0.23
TMEFF1-201ENST00000374879 H3BMG7 143 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 MEOX1P50221 254 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 CT45A1Q5HYN5 189 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 MTURNQ8N3F0 131 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 OR1L8Q8NGR8 309 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 CT45A3Q8NHU0 189 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 A0A1B0GUT8 65 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 PRDX2P32119 198 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 ZNF414Q96IQ9 312 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 ARRDC1-AS1Q9H2J1 176 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 TRAV8-1A0A0A6YYK1 113 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 CFHR2P36980 270 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 NHP2Q9NX24 153 aaKnown RBP16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 SIGLEC8Q9NYZ4 499 aa16.49■□□□□ 0.23
TMEFF1-201ENST00000374879 TCRBV4S1A1TA0A5B7 111 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 DLL1O00548 723 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 TMEM164Q5U3C3 297 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 NPIPB3Q92617 1050 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 DKK2Q9UBU2 259 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 PCNX2A6NKB5 2137 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 GPR179Q6PRD1 2367 aa16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 KLF14Q8TD94 323 aaPredicted RBP16.48■□□□□ 0.23
TMEFF1-201ENST00000374879 CACNG8Q8WXS5 425 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 IGKV2D-26A0A0A0MRZ7 120 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 E9PLD3 99 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 IGKV1-16P04430 117 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 TCRAP04437 139 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 CT45A6P0DMU7 189 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 CT45A5P0DMU8 189 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 CT45A7P0DMV0 189 aa16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 COLQQ9Y215 455 aaPredicted RBP16.47■□□□□ 0.23
TMEFF1-201ENST00000374879 POU2AF1Q16633 256 aa16.46■□□□□ 0.23
TMEFF1-201ENST00000374879 CFAP161Q6P656 301 aa16.46■□□□□ 0.23
TMEFF1-201ENST00000374879 AMTNQ6UX39 209 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms