RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 NCOA6Q14686 2063 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 WISP1O95388 367 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 NPFFR1Q9GZQ6 430 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 SMPXQ9UHP9 88 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 ITLN2Q8WWU7 325 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 SLC25A15Q9Y619 301 aa10.17□□□□□ -0.78
NPLOC4-202ENST00000374747 ESPL1Q14674 2120 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 LOC400499M0QZD8 3231 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 IGKV1D-8A0A087WSZ0 117 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 NBR2O15453 112 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 B3GALT5-AS1P59052 145 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 PLSCR4Q9NRQ2 329 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 IL18BPO95998 194 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 NEU4Q8WWR8 484 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 REG4Q9BYZ8 158 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 ZNF319Q9P2F9 582 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 CD7P09564 240 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 OR9G9P0C7N8 305 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 TDGF1P13385 188 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 KIR3DL3Q8N743 410 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 LINC01587Q99440 93 aa10.16□□□□□ -0.78
NPLOC4-202ENST00000374747 LHFPL1Q86WI0 220 aa10.15□□□□□ -0.78
NPLOC4-202ENST00000374747 F2Z2F3 143 aa10.15□□□□□ -0.78
NPLOC4-202ENST00000374747 DUTP33316 252 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-202ENST00000374747 CCL3L1P16619 93 aa10.15□□□□□ -0.78
NPLOC4-202ENST00000374747 SRSF6Q13247 344 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-202ENST00000374747 LINC01549A6NIU2 74 aa10.15□□□□□ -0.79
NPLOC4-202ENST00000374747 C17orf100A8MU93 164 aa10.15□□□□□ -0.79
NPLOC4-202ENST00000374747 SLC25A20O43772 301 aa10.15□□□□□ -0.79
NPLOC4-202ENST00000374747 FGFBP3Q8TAT2 258 aa10.15□□□□□ -0.79
NPLOC4-202ENST00000374747 RASL11AQ6T310 242 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 IGHG3P01860 377 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 EVI2AP22794 236 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 SRSF7Q16629 238 aaKnown RBP eCLIP10.14□□□□□ -0.793e-8■■■□□ 14.9
NPLOC4-202ENST00000374747 TREML4Q6UXN2 200 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 SLC25A48Q6ZT89 311 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 SEPSECSQ9HD40 501 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 PF4P02776 101 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 Q6ZS92 163 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 LINC01551Q86U37 167 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 CCL19Q99731 98 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 ETV2O00321 342 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 ATXN8Q156A1 80 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 ACTL10Q5JWF8 245 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 RNF166Q96A37 237 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
NPLOC4-202ENST00000374747 CACNA1DQ01668 2161 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 IGHV1-18A0A0C4DH31 117 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 FOXF2Q12947 444 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 TMEM42Q69YG0 159 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 GGTLC1Q9BX51 225 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 CRIM1Q9NZV1 1036 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 TRGV2A0A075B6R0 118 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 SUPT4H1P63272 117 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 PYY3Q5JQD4 70 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 C8orf46Q8TAG6 207 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 ASPMQ8IZT6 3477 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 MRPL52Q86TS9 123 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 MSRB2Q9Y3D2 182 aa10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 SRSF4Q08170 494 aaKnown RBP10.13□□□□□ -0.79
NPLOC4-202ENST00000374747 CD28P10747 220 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 PPIFP30405 207 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 FOXG1P55316 489 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 TMEM133Q9H2Q1 129 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 BOD1L1Q8NFC6 3051 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 MYOD1P15172 320 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 CD300EQ496F6 205 aaPredicted RBP10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 ROS1P08922 2347 aa10.12□□□□□ -0.79
NPLOC4-202ENST00000374747 MUC22E2RYF6 1773 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 LAGE3Q14657 143 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 BCL6BQ8N143 479 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 GLMPQ8WWB7 406 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 AGMATQ9BSE5 352 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 FER1L5A0AVI2 2057 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 M0R2P5 195 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 TRAV5A0A0B4J249 113 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 DUSP14O95147 198 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 TMEM256Q8N2U0 113 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 TMEM167AQ8TBQ9 72 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 MBD3L4A6NDZ8 208 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 MBD3L3A6NE82 208 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 MBD3L5A6NJ08 208 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 MBD3L2Q8NHZ7 208 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 PNRC2Q9NPJ4 139 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 FOXL2NBQ6ZUU3 175 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 GTSCR1Q86UQ5 136 aa10.11□□□□□ -0.79
NPLOC4-202ENST00000374747 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms