RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CEP250Q9BV73 2442 aa14.16□□□□□ -0.14
PTPRU-202ENST00000373779 FAM71F2Q6NXP2 309 aa14.16□□□□□ -0.14
PTPRU-202ENST00000373779 FAM159AQ6UWV7 190 aa14.16□□□□□ -0.14
PTPRU-202ENST00000373779 C18orf32Q8TCD1 76 aa14.16□□□□□ -0.14
PTPRU-202ENST00000373779 ZNF474Q6S9Z5 364 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-202ENST00000373779 ZNRD1Q9P1U0 126 aa14.16□□□□□ -0.14
PTPRU-202ENST00000373779 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-202ENST00000373779 ZNF407Q9C0G0 2248 aa14.16□□□□□ -0.14
PTPRU-202ENST00000373779 IGHV3OR16-10A0A075B7F0 116 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 SH2D7A6NKC9 451 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-202ENST00000373779 D6R8Y8 96 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 FAM74A4Q5TZK3 123 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 AMMECR1LQ6DCA0 310 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 SNCGO76070 127 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 NDUFA3O95167 84 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 MPV17L2Q567V2 206 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 RAXQ9Y2V3 346 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 DOCK11Q5JSL3 2073 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 GGTLC3B5MD39 225 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 PPP1R17O96001 155 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 HSD52Q0P140 79 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 KIR3DL3Q8N743 410 aa14.15□□□□□ -0.14
PTPRU-202ENST00000373779 SRSF6Q13247 344 aaKnown RBP14.15□□□□□ -0.15
PTPRU-202ENST00000373779 DMRTC2Q8IXT2 367 aaPredicted RBP14.15□□□□□ -0.15
PTPRU-202ENST00000373779 MRPL16Q9NX20 251 aaKnown RBP14.15□□□□□ -0.15
PTPRU-202ENST00000373779 HEATR1Q9H583 2144 aaKnown RBP14.14□□□□□ -0.15
PTPRU-202ENST00000373779 ZNF56Q15929 161 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 C17orf58Q2M2W7 97 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 C11orf52Q96A22 123 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 IGKV2-40A0A087WW87 121 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-202ENST00000373779 IGKV2D-40P01614 121 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-202ENST00000373779 SLC25A2Q9BXI2 301 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 SIGLEC9Q9Y336 463 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 MRPS16Q9Y3D3 137 aaKnown RBP14.14□□□□□ -0.15
PTPRU-202ENST00000373779 DPM2O94777 84 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 VWC2Q2TAL6 325 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 LYZL1Q6UWQ5 148 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 Q86TA4 180 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 DYNLRB2Q8TF09 96 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 PIMREGQ9BSJ6 248 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 NCOR1P1Q9H4R4 102 aa14.14□□□□□ -0.15
PTPRU-202ENST00000373779 C2orf16Q68DN1 1984 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 NPIPB5A8MRT5 1133 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 NDUFA4L2Q9NRX3 87 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 UBE2V1Q13404 147 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 RNF5Q99942 180 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 GFRA4Q9GZZ7 299 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 SFTPCP11686 197 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 PPIFP30405 207 aaKnown RBP14.13□□□□□ -0.15
PTPRU-202ENST00000373779 TMEM249Q2WGJ8 235 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 A0A1W2PPI3 338 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 EVI2AP22794 236 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 PYGO2Q9BRQ0 406 aa14.13□□□□□ -0.15
PTPRU-202ENST00000373779 NPIPB6E9PJ23 425 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 COX6CP09669 75 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 ZNF138P52744 262 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 NHP2Q9NX24 153 aaKnown RBP14.12□□□□□ -0.15
PTPRU-202ENST00000373779 ZNF134P52741 427 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 RPL15P61313 204 aaKnown RBP14.12□□□□□ -0.15
PTPRU-202ENST00000373779 PSG3Q16557 428 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 RPRMLQ8N4K4 120 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
PTPRU-202ENST00000373779 F2Z2F3 143 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 TMEM170BQ5T4T1 132 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 OR9G4Q8NGQ1 327 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 SHANK1Q9Y566 2161 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 KLRB1Q12918 225 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 LYPD2Q6UXB3 125 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 SMIM27A0A1W2PRY6 76 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 IGKCP01834 107 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 COA6Q5JTJ3 125 aaKnown RBP14.12□□□□□ -0.15
PTPRU-202ENST00000373779 ARL6IP6Q8N6S5 226 aa14.12□□□□□ -0.15
PTPRU-202ENST00000373779 A0A087X0K7 114 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 PDLIM4P50479 330 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 RHOGP84095 191 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 OR5A1Q8NGJ0 315 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 NCR2O95944 276 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 GATA4P43694 442 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 OR2K2Q8NGT1 345 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 BUB1B-PAK6H3BSN5 160 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 TPTE2P1Q5T6R2 138 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 ZNF492Q9P255 531 aa14.11□□□□□ -0.15
PTPRU-202ENST00000373779 ADIPOQQ15848 244 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 LYPD1Q8N2G4 141 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 DOCK7Q96N67 2140 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 SRSF1Q07955 248 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPRU-202ENST00000373779 GUSBP1Q15486 140 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 ZNF833PQ6ZTB9 187 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 SLAQ13239 276 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 DUX4L9Q6RFH8 374 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-202ENST00000373779 A0A1B0GWB2 263 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 SH2D1AO60880 128 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 PRSS2P07478 247 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 IGLC2P0DOY2 106 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 IGLC3P0DOY3 106 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 DTX1Q86Y01 620 aa14.1□□□□□ -0.15
PTPRU-202ENST00000373779 K7EN84 100 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 FAM231DQ6ZW35 169 aa14.09□□□□□ -0.15
PTPRU-202ENST00000373779 COX11Q9Y6N1 276 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms