RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 K7EN84 100 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 NDUFS7O75251 213 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 FOXL1Q12952 345 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 IGFL2Q6UWQ7 119 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 IGKV1OR2-108A0A075B7D4 117 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 NUPR1O60356 82 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 TWIST1Q15672 202 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 GPR82Q96P67 336 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 VKORC1Q9BQB6 163 aa14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 KLF2Q9Y5W3 355 aaPredicted RBP14.27□□□□□ -0.12
TRAF3IP1-201ENST00000373327 SIGLEC9Q9Y336 463 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 A6NNC1 897 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 LEPROTL1O95214 131 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 IGHV2-70P01814 119 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 GATA4P43694 442 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 FXYD7P58549 80 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TEX45Q8NA69 505 aa14.27□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CD99P14209 185 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TMEM30BQ3MIR4 351 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 DMRTA1Q5VZB9 504 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 IGFL3Q6UXB1 125 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 NUP37Q8NFH4 326 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CDC42EP3Q9UKI2 254 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 LRRK2Q5S007 2527 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CFHR2P36980 270 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 FAM168AQ92567 244 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 THBDP07204 575 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 HTN1P15515 57 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RPL15P61313 204 aaKnown RBP14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 KLRB1Q12918 225 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RIGQ13278 110 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 KCNS1Q96KK3 526 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 NDUFA4L2Q9NRX3 87 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 C1RLQ9NZP8 487 aa14.26□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TMEM189A5PLL7 270 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 COX19Q49B96 90 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 FAM169BQ8N8A8 192 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 FBXL7Q9UJT9 491 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 NBR2O15453 112 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 LHBP01229 141 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 HBBP68871 147 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RELQ04864 619 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CCDC144NLQ6NUI1 221 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 LOC102724200A0A096LPH7 203 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TMEM219Q86XT9 240 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 OSTCQ9NRP0 149 aa14.25□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CA7P43166 264 aa14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 IZUMO1RA6ND01 250 aa14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RPP21Q9H633 154 aaKnown RBP14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 C21orf62Q9NYP8 219 aa14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 BUB1B-PAK6H3BSN5 160 aa14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 GRAMD2BQ96HH9 432 aa14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 MRPL36Q9P0J6 103 aaKnown RBP14.24□□□□□ -0.13
TRAF3IP1-201ENST00000373327 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRSS1P07477 247 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 OR5AN1Q8NGI8 311 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 ARPC1AQ92747 370 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RNF125Q96EQ8 232 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 NDUFAF3Q9BU61 184 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RPLP1P05386 114 aaKnown RBP14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 FAM106CPP0CH98 169 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PF4V1P10720 104 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TMEM155Q4W5P6 130 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CLEC19AQ6UXS0 136 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 LINC00469Q8N7U9 141 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 NUP35Q8NFH5 326 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 Q8TAT8 98 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 C18orf15Q96N68 181 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 MAP1LC3CQ9BXW4 147 aa14.23□□□□□ -0.13
TRAF3IP1-201ENST00000373327 ATP5IP56385 69 aaPredicted RBP14.22□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TAS2R60P59551 318 aa14.22□□□□□ -0.13
TRAF3IP1-201ENST00000373327 GOSR1O95249 250 aa14.22□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TCF21O43680 179 aa14.22□□□□□ -0.13
TRAF3IP1-201ENST00000373327 DMRTC2Q8IXT2 367 aaPredicted RBP14.22□□□□□ -0.13
TRAF3IP1-201ENST00000373327 NACAE9PAV3 2078 aa14.22□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRR20EP86478 221 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRR20CP86479 221 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRR20DP86480 221 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRR20BP86481 221 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRR20AP86496 221 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CENPVQ7Z7K6 275 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 SLC25A39Q9BZJ4 359 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 TMEM191AQ9H0A3 160 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 RABAC1Q9UI14 185 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 EREGO14944 169 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 DDB2Q92466 427 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PRDM13Q9H4Q3 707 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 LSM4Q9Y4Z0 139 aaKnown RBP14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 ADAMTS20P59510 1910 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 IGKV2-40A0A087WW87 121 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 IGKV2D-40P01614 121 aaPredicted RBP14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 CKS2P33552 79 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 UQCRFS1P47985 274 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 ZNF833PQ6ZTB9 187 aa14.21□□□□□ -0.13
TRAF3IP1-201ENST00000373327 PTTG1IPP53801 180 aa14.21□□□□□ -0.14
TRAF3IP1-201ENST00000373327 DEFB104AQ8WTQ1 72 aa14.21□□□□□ -0.14
TRAF3IP1-201ENST00000373327 SLC25A2Q9BXI2 301 aa14.21□□□□□ -0.14
TRAF3IP1-201ENST00000373327 C9JCJ5 164 aa14.2□□□□□ -0.14
TRAF3IP1-201ENST00000373327 ZNF324O75467 553 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms