RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.32
PRDM1-203ENST00000369096 RALGAPA1Q6GYQ0 2036 aa13.02□□□□□ -0.32
PRDM1-203ENST00000369096 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.32
PRDM1-203ENST00000369096 AMBPP02760 352 aa13.02□□□□□ -0.32
PRDM1-203ENST00000369096 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.32
PRDM1-203ENST00000369096 THBDP07204 575 aa13.02□□□□□ -0.33
PRDM1-203ENST00000369096 C15orf32Q32M92 178 aa13.02□□□□□ -0.33
PRDM1-203ENST00000369096 TPTE2P1Q5T6R2 138 aa13.02□□□□□ -0.33
PRDM1-203ENST00000369096 ZNF497Q6ZNH5 498 aa13.02□□□□□ -0.33
PRDM1-203ENST00000369096 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 GREM1O60565 184 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 CSRP3P50461 194 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 KLF17Q5JT82 389 aaPredicted RBP13.01□□□□□ -0.33
PRDM1-203ENST00000369096 A0A087X0K7 114 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 hDV102S1A0JD36 115 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 SUMO4Q6EEV6 95 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 CACNA1HO95180 2353 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 IGFBP3P17936 291 aaPredicted RBP13.01□□□□□ -0.33
PRDM1-203ENST00000369096 HIST3H2BBQ8N257 126 aa13.01□□□□□ -0.33
PRDM1-203ENST00000369096 UBE2CO00762 179 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 TREML4Q6UXN2 200 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 ZNF319Q9P2F9 582 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 COL6A6A6NMZ7 2263 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 LEPROTO15243 131 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 TRBV24-1A0A075B6N3 115 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 VCYO14598 125 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 PSG1P11464 419 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 CSRP2Q16527 193 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 LCN12Q6JVE5 192 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 RIF1Q5UIP0 2472 aaKnown RBP13□□□□□ -0.33
PRDM1-203ENST00000369096 MPV17L2Q567V2 206 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 KLF12Q9Y4X4 402 aa13□□□□□ -0.33
PRDM1-203ENST00000369096 IGKV1-9A0A0C4DH69 117 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 RPL35AP18077 110 aaKnown RBP12.99□□□□□ -0.33
PRDM1-203ENST00000369096 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 TMEM219Q86XT9 240 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 PRDM6Q9NQX0 595 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 ERCC8Q13216 396 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 CXCL1P09341 107 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
PRDM1-203ENST00000369096 WFDC1Q9HC57 220 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 DOCK3Q8IZD9 2030 aa12.99□□□□□ -0.33
PRDM1-203ENST00000369096 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
PRDM1-203ENST00000369096 MYMXA0A1B0GTQ4 84 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 LILRA1O75019 489 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 DTX1Q86Y01 620 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 ZNF138P52744 262 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 SPATA31B1PQ5VZV4 182 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
PRDM1-203ENST00000369096 SLC25A28Q96A46 364 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 F8VVB4 439 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 F8VWA3 439 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 ACTL10Q5JWF8 245 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 TGFBR3LH3BV60 316 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 Q8TAT8 98 aa12.98□□□□□ -0.33
PRDM1-203ENST00000369096 DLEU1O43261 78 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 FCN3O75636 299 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 CSTL1Q9H114 145 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 UBE2E2Q96LR5 201 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 SLC25A39Q9BZJ4 359 aaPredicted RBP12.97□□□□□ -0.33
PRDM1-203ENST00000369096 MBNL3Q9NUK0 354 aaKnown RBP12.97□□□□□ -0.33
PRDM1-203ENST00000369096 C9JAW5 83 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 MLNRO43193 412 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 SPXQ9BT56 116 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
PRDM1-203ENST00000369096 FGF16O43320 207 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 NDPQ00604 133 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
PRDM1-203ENST00000369096 DOCK9Q9BZ29 2069 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 SPINK8P0C7L1 97 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 MPZP25189 248 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 IGKV1D-8A0A087WSZ0 117 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 ZNF114Q8NC26 417 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 TNFRSF14Q92956 283 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 TIMM21Q9BVV7 248 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 SRSF7Q16629 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRDM1-203ENST00000369096 TMEM158Q8WZ71 300 aa12.96□□□□□ -0.33
PRDM1-203ENST00000369096 RPUSD1Q9UJJ7 312 aaKnown RBP12.96□□□□□ -0.33
PRDM1-203ENST00000369096 ZNF236Q9UL36 1845 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 A0A1B0GWJ7 208 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 KIR3DS1Q14943 382 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 FAM166AQ6J272 317 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 AGMATQ9BSE5 352 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 TMEM126AQ9H061 195 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 TMEM242Q9NWH2 141 aa12.96□□□□□ -0.34
PRDM1-203ENST00000369096 FAM90A9PA6NNJ1 464 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 C1orf194Q5T5A4 169 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 C9orf139Q6ZV77 190 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 TMEM256Q8N2U0 113 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 FBLN5Q9UBX5 448 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 LINC01551Q86U37 167 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 LYZL4Q96KX0 146 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 SELLP14151 372 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 BTCP35070 178 aa12.95□□□□□ -0.34
PRDM1-203ENST00000369096 SNHG12Q9BXW3 62 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms