RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZNF329Q86UD4 541 aa13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 EXOC3-AS1Q8N2X6 119 aa13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 C1orf162Q8NEQ5 155 aaPredicted RBP13.08□□□□□ -0.32
CLSTN1-201ENST00000361311 IGKCP01834 107 aa13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 PSG3Q16557 428 aa13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 RAXQ9Y2V3 346 aa13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 SNCGO76070 127 aa13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 COX6CP09669 75 aa13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 LSM4Q9Y4Z0 139 aaKnown RBP13.07□□□□□ -0.32
CLSTN1-201ENST00000361311 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 H3BRM9 83 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 PRSS2P07478 247 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 SCGB3A1Q96QR1 104 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 PHLDA3Q9Y5J5 127 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 C9orf118A6NHY6 69 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 CD3EP07766 207 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 LOXL3P58215 753 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 C8orf46Q8TAG6 207 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 RPUSD1Q9UJJ7 312 aaKnown RBP13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 TGFAP01135 160 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 PPBPP02775 128 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 RNASE2P10153 161 aaKnown RBP13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 LOC105371242A0A075B767 164 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 PPIAL4CA0A0B4J2A2 164 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 IGHV1-24A0A0C4DH33 117 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 PPIAL4GP0DN37 164 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
CLSTN1-201ENST00000361311 NCR2O95944 276 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 FAM231DQ6ZW35 169 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 CACNA1BQ00975 2339 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 LGALS3P17931 250 aaKnown RBP13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 MEF2CQ06413 473 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 DLX6P56179 175 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 Q6ZSR3 168 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 C16orf92Q96LL3 132 aa13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 BEX4Q9NWD9 120 aaPredicted RBP13.05□□□□□ -0.32
CLSTN1-201ENST00000361311 NKX2-8O15522 239 aa13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 COX8AP10176 69 aa13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 VWC2Q2TAL6 325 aa13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 TOMM40O96008 361 aa13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 CCDC144NLQ6NUI1 221 aa13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 DEFB125Q8N687 156 aa13.04□□□□□ -0.32
CLSTN1-201ENST00000361311 EVI2AP22794 236 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 HOXA3O43365 443 aaPredicted RBP13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 VKORC1Q9BQB6 163 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 ANAPC13Q9BS18 74 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 VCX2Q9H322 139 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 TMEM170BQ5T4T1 132 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 PCNX3Q9H6A9 2034 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 PMS2P5A8MQ11 134 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 DGAT2L7PQ6IED9 249 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 RNF125Q96EQ8 232 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
CLSTN1-201ENST00000361311 FAM168AQ92567 244 aa13.02□□□□□ -0.32
CLSTN1-201ENST00000361311 PROK2Q9HC23 129 aa13.02□□□□□ -0.32
CLSTN1-201ENST00000361311 TMEM14BQ9NUH8 114 aa13.02□□□□□ -0.32
CLSTN1-201ENST00000361311 TMEM238C9JI98 176 aa13.02□□□□□ -0.33
CLSTN1-201ENST00000361311 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
CLSTN1-201ENST00000361311 DTX1Q86Y01 620 aa13.02□□□□□ -0.33
CLSTN1-201ENST00000361311 K7EP34 96 aa13.02□□□□□ -0.33
CLSTN1-201ENST00000361311 TEX29Q8N6K0 151 aa13.02□□□□□ -0.33
CLSTN1-201ENST00000361311 GFRA4Q9GZZ7 299 aa13.02□□□□□ -0.33
CLSTN1-201ENST00000361311 IGHV3OR16-8A0A075B7F1 116 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 SS18L1O75177 396 aaPredicted RBP13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 PPIFP30405 207 aaKnown RBP13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 WDR86Q86TI4 376 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 ODF3L1Q8IXM7 274 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 C9orf106Q8NAJ2 232 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 M0R381 172 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 WNT2P09544 360 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 METTL26Q96S19 204 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 EMP1P54849 157 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 Q0VFX4 171 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 AMN1Q8IY45 258 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 OR10J6PQ8NGY7 276 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 GTF3C1Q12789 2109 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
CLSTN1-201ENST00000361311 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 NPIPB5A8MRT5 1133 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 FRMD6-AS1P0C7T7 363 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 CT83Q5H943 113 aa13□□□□□ -0.33
CLSTN1-201ENST00000361311 PPP1R27Q86WC6 154 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms