RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 BTCP35070 178 aa13.98□□□□□ -0.17
COL4A2-201ENST00000360467 MBD3L4A6NDZ8 208 aaPredicted RBP13.98□□□□□ -0.17
COL4A2-201ENST00000360467 MBD3L3A6NE82 208 aaPredicted RBP13.98□□□□□ -0.17
COL4A2-201ENST00000360467 MBD3L5A6NJ08 208 aaPredicted RBP13.98□□□□□ -0.17
COL4A2-201ENST00000360467 MLANAQ16655 118 aa13.98□□□□□ -0.17
COL4A2-201ENST00000360467 MBD3L2Q8NHZ7 208 aaPredicted RBP13.98□□□□□ -0.17
COL4A2-201ENST00000360467 OVOL3O00110 214 aa13.98□□□□□ -0.17
COL4A2-201ENST00000360467 NEUROG3Q9Y4Z2 214 aa13.98□□□□□ -0.17
COL4A2-201ENST00000360467 LINC00473A8K010 186 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 M0R1W7 72 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 ZNF318Q5VUA4 2279 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 Q6ZS92 163 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 IGHV3-16A0A0C4DH30 117 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 DPM2O94777 84 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 GAS1P54826 345 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 RNF114Q9Y508 228 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 SH2D1AO60880 128 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 MSMBP08118 114 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 NIT1Q86X76 327 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 RHPN1-AS1Q9BWJ2 59 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 PEF1Q9UBV8 284 aaKnown RBP13.97□□□□□ -0.17
COL4A2-201ENST00000360467 J3QKU1 62 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 B3GALT5-AS1P59052 145 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 NRN1Q9NPD7 142 aa13.97□□□□□ -0.17
COL4A2-201ENST00000360467 PNRC2Q9NPJ4 139 aaKnown RBP13.97□□□□□ -0.17
COL4A2-201ENST00000360467 LYZL1Q6UWQ5 148 aa13.96□□□□□ -0.17
COL4A2-201ENST00000360467 IGKCP01834 107 aa13.96□□□□□ -0.17
COL4A2-201ENST00000360467 PRB1P04280 392 aa13.96□□□□□ -0.17
COL4A2-201ENST00000360467 FNDC4Q9H6D8 234 aaPredicted RBP13.96□□□□□ -0.17
COL4A2-201ENST00000360467 DEFB131AP59861 70 aa13.96□□□□□ -0.17
COL4A2-201ENST00000360467 BMPERQ8N8U9 685 aa13.96□□□□□ -0.17
COL4A2-201ENST00000360467 H3BUT2 72 aa13.96□□□□□ -0.18
COL4A2-201ENST00000360467 XCL2Q9UBD3 114 aa13.96□□□□□ -0.18
COL4A2-201ENST00000360467 A6NNC1 897 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 KNCNA6PVL3 124 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 D6R8Y8 96 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 H0YIZ8 118 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 J3QRE1 110 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 LCN12Q6JVE5 192 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
COL4A2-201ENST00000360467 TICRRQ7Z2Z1 1910 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 A0A1B0GWJ7 208 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 INSP01308 110 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 SPCS1Q9Y6A9 102 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 C14orf178Q8N769 122 aaPredicted RBP13.95□□□□□ -0.18
COL4A2-201ENST00000360467 C1orf159Q96HA4 380 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 SPSB3Q6PJ21 355 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 GGTLC1Q9BX51 225 aa13.95□□□□□ -0.18
COL4A2-201ENST00000360467 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 SMKR1H3BMG3 65 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 LAGE3Q14657 143 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 DERL1Q9BUN8 251 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 JPT2Q9H910 190 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 SIGLEC9Q9Y336 463 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 PAX4O43316 350 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 DKK1O94907 266 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 ATRAIDQ6UW56 229 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 F5H768 121 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 CDK2AP2O75956 126 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 RPL36AP83881 106 aaKnown RBP13.94□□□□□ -0.18
COL4A2-201ENST00000360467 LY6G6FQ5SQ64 297 aa13.94□□□□□ -0.18
COL4A2-201ENST00000360467 RPL36ALQ969Q0 106 aaKnown RBP13.94□□□□□ -0.18
COL4A2-201ENST00000360467 TRAV8-2A0A0B4J237 113 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 ZSWIM8A7E2V4 1837 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 KLK9Q9UKQ9 250 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
COL4A2-201ENST00000360467 ORMDL2Q53FV1 153 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 TRAV8-1A0A0A6YYK1 113 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 C17orf82Q86X59 251 aaPredicted RBP13.93□□□□□ -0.18
COL4A2-201ENST00000360467 FAM223BA6NKX1 122 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 ATP6V0E1O15342 81 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 DUX4L9Q6RFH8 374 aaPredicted RBP13.93□□□□□ -0.18
COL4A2-201ENST00000360467 FAM223AQ8IWN6 122 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 TMEM86BQ8N661 226 aa13.93□□□□□ -0.18
COL4A2-201ENST00000360467 Q6P435 159 aa13.92□□□□□ -0.18
COL4A2-201ENST00000360467 F2Z2F3 143 aa13.92□□□□□ -0.18
COL4A2-201ENST00000360467 IGKV1-16P04430 117 aa13.92□□□□□ -0.18
COL4A2-201ENST00000360467 A0A1W2PRE2 83 aa13.92□□□□□ -0.18
COL4A2-201ENST00000360467 ZNF138P52744 262 aa13.92□□□□□ -0.18
COL4A2-201ENST00000360467 A0A096LPF7 62 aa13.92□□□□□ -0.18
COL4A2-201ENST00000360467 FAM90A9PA6NNJ1 464 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 HOXA3O43365 443 aaPredicted RBP13.91□□□□□ -0.18
COL4A2-201ENST00000360467 CSTL1Q9H114 145 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 FER1L5A0AVI2 2057 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 CGB3P0DN86 165 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 LINC01619G3V211 115 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 CR1LQ2VPA4 569 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 ATP5L2Q7Z4Y8 100 aa13.91□□□□□ -0.18
COL4A2-201ENST00000360467 IGKV1-5P01602 117 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 ESPL1Q14674 2120 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 TSKUQ8WUA8 353 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 G3V318 75 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 SLC25A2Q9BXI2 301 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 SSBP2P81877 361 aaPredicted RBP13.9□□□□□ -0.18
COL4A2-201ENST00000360467 LURAP1LQ8IV03 231 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 USMG5Q96IX5 58 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 ID3Q02535 119 aa13.9□□□□□ -0.18
COL4A2-201ENST00000360467 SPAG8Q99932 426 aaPredicted RBP13.9□□□□□ -0.18
COL4A2-201ENST00000360467 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms