RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
CHD3-202ENST00000358181 COL24A1Q17RW2 1714 aa8.09□□□□□ -1.12
CHD3-202ENST00000358181 RPUSD1Q9UJJ7 312 aaKnown RBP8.08□□□□□ -1.12
CHD3-202ENST00000358181 TRBV25-1A0A075B6N4 114 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 TRBV9A0A0B4J1U6 114 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 LY6HO94772 140 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 OR9G9P0C7N8 305 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 C14orf178Q8N769 122 aaPredicted RBP8.08□□□□□ -1.12
CHD3-202ENST00000358181 CRYGCP07315 174 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 TM4SF5O14894 197 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 IGHV3-33P01772 117 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 IGHV3-30-3P0DP02 117 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 SUPT4H1P63272 117 aaKnown RBP8.08□□□□□ -1.12
CHD3-202ENST00000358181 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
CHD3-202ENST00000358181 IL36BQ9NZH7 164 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 SEC16AO15027 2179 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 VCYO14598 125 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 GGACTQ9BVM4 153 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 TIMM21Q9BVV7 248 aa8.08□□□□□ -1.12
CHD3-202ENST00000358181 LINC01619G3V211 115 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 SOCS3O14543 225 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 RND3P61587 244 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 GTSF1Q8WW33 167 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 SIGMAR1Q99720 223 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 TMEM133Q9H2Q1 129 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 PSG8Q9UQ74 426 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 TUBGCP6Q96RT7 1819 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 FER1L5A0AVI2 2057 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 SCAND1P57086 179 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 IGHG4P01861 327 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 OR10W1Q8NGF6 305 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 FAM90A26D6RGX4 464 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 TNFSF13O75888 250 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 Q8TAT8 98 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 PILRAQ9UKJ1 303 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 IZUMO1RA6ND01 250 aa8.07□□□□□ -1.12
CHD3-202ENST00000358181 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 CD300LDQ6UXZ3 194 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 EXOC3-AS1Q8N2X6 119 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 PTPRFP10586 1907 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 PARP14Q460N5 1801 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 MESP1Q9BRJ9 268 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 IGHV4OR15-8A0A075B7B6 117 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 A0A087WW49 117 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 TRACP01848 142 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 TCF15Q12870 199 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 BMPERQ8N8U9 685 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 TMEM170AQ8WVE7 144 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 ZNF479Q96JC4 524 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 LY75O60449 1722 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
CHD3-202ENST00000358181 CTSGP08311 255 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 SPINK13Q1W4C9 94 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 SLC25A47Q6Q0C1 308 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 C9orf47Q6ZRZ4 202 aa8.06□□□□□ -1.12
CHD3-202ENST00000358181 A6NNC1 897 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 RNASE13Q5GAN3 156 aaKnown RBP8.05□□□□□ -1.12
CHD3-202ENST00000358181 CFHR5Q9BXR6 569 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 ESM1Q9NQ30 184 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 SCN5AQ14524 2016 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 GREM1O60565 184 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 TMEM105Q8N8V8 129 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 C12orf77C9JDV5 145 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
CHD3-202ENST00000358181 ZNF672Q499Z4 452 aaPredicted RBP8.05□□□□□ -1.12
CHD3-202ENST00000358181 KLF17Q5JT82 389 aaPredicted RBP8.05□□□□□ -1.12
CHD3-202ENST00000358181 SMIM8Q96KF7 97 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 A0A0A6YYD4 124 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 XCL1P47992 114 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 AQP3Q92482 292 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 OVOL2Q9BRP0 275 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 LINC00312Q9Y6C7 94 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 CACNA1IQ9P0X4 2223 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 SIGLEC9Q9Y336 463 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 ANKRD36A6QL64 1941 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 EFNA4P52798 201 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 LHFPL6Q9Y693 200 aa8.05□□□□□ -1.12
CHD3-202ENST00000358181 BUB3O43684 328 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 APC2O95996 2303 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 RALGAPA1Q6GYQ0 2036 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 PPP1R3EQ9H7J1 279 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 DEPPQ9NTK1 212 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 SCN4AP35499 1836 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.04□□□□□ -1.12
CHD3-202ENST00000358181 IFITM3Q01628 133 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 IFI27L1Q96BM0 104 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 A0A1W2PPC1 479 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 Q5BKY6 102 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 PUSL1Q8N0Z8 303 aaKnown RBP8.04□□□□□ -1.12
CHD3-202ENST00000358181 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 PVRIGQ6DKI7 326 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 ZNF236Q9UL36 1845 aa8.04□□□□□ -1.12
CHD3-202ENST00000358181 PMS2P5A8MQ11 134 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms