RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 C15orf62A8K5M9 175 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 TDGF1P3P51864 188 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 STHQ8IWL8 128 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 IGHV2-26A0A0B4J1V2 119 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 SPSB3Q6PJ21 355 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 GREB1Q4ZG55 1949 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 CDKN1AP38936 164 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 CD177Q8N6Q3 437 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 PLEKHB2Q96CS7 222 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 A0A0G2JMZ2 1700 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 CD5LO43866 347 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 CLPSP04118 112 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 SELLP14151 372 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
CHD4-201ENST00000357008 TPTE2P1Q5T6R2 138 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 LINC00473A8K010 186 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 BMPERQ8N8U9 685 aa12.18□□□□□ -0.46
CHD4-201ENST00000357008 TMEM8BA6NDV4 472 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 Q6P435 159 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 LYPD1Q8N2G4 141 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 KLHDC3Q9BQ90 382 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 FNDC10F2Z333 226 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 THBDP07204 575 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 ESDP10768 282 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 CFPP27918 469 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 LYNX1G3V0Z9 82 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 IGHV1-8P0DP01 117 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 LYNX1P0DP58 116 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 TMEM86BQ8N661 226 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 DLX4Q92988 240 aaPredicted RBP12.17□□□□□ -0.46
CHD4-201ENST00000357008 PRSS22Q9GZN4 317 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 ABCA7Q8IZY2 2146 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 A8MWP6 167 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 PLSCR4Q9NRQ2 329 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 ZNF138P52744 262 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 Q0VG73 95 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 KIR3DS1Q14943 382 aa12.17□□□□□ -0.46
CHD4-201ENST00000357008 CD33P20138 364 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 PSG3Q16557 428 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 GVINP1Q7Z2Y8 2422 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 SH2D1AO60880 128 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 RPL15P61313 204 aaKnown RBP12.16□□□□□ -0.46
CHD4-201ENST00000357008 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 LCTP09848 1927 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 C5orf24Q7Z6I8 188 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 NTN3O00634 580 aaPredicted RBP12.16□□□□□ -0.46
CHD4-201ENST00000357008 TOMM40O96008 361 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 C20orf144Q9BQM9 153 aa12.16□□□□□ -0.46
CHD4-201ENST00000357008 MPDZO75970 2070 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 C9JQL5 133 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 PRR31Q5SQ13 230 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 A0A0U1RRA0 63 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 GAGE12BA1L429 117 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 Q6ZRM9 215 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 TRAV41A0A0B4J266 112 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 H0YJW9 148 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 PRTN3P24158 256 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 DPH3P1Q9H4G8 78 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 IL18BPO95998 194 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 WNT2P09544 360 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
CHD4-201ENST00000357008 ADARB2-AS1A8MUL3 147 aa12.15□□□□□ -0.47
CHD4-201ENST00000357008 C17orf82Q86X59 251 aaPredicted RBP12.15□□□□□ -0.47
CHD4-201ENST00000357008 EREGO14944 169 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
CHD4-201ENST00000357008 ZC2HC1BQ5TFG8 222 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 TP53BP1Q12888 1972 aaPredicted RBP12.14□□□□□ -0.47
CHD4-201ENST00000357008 TRGV4A0A0C4DH28 118 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 CRPP02741 224 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
CHD4-201ENST00000357008 FXYD7P58549 80 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 C9orf139Q6ZV77 190 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 VCYO14598 125 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 TMEM155Q4W5P6 130 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 GFRA4Q9GZZ7 299 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 CACNA1EQ15878 2313 aa12.14□□□□□ -0.47
CHD4-201ENST00000357008 ZDBF2Q9HCK1 2354 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 TMEM158Q8WZ71 300 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 ZNF581Q9P0T4 197 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 PFN1P07737 140 aaKnown RBP12.13□□□□□ -0.47
CHD4-201ENST00000357008 LINC00158P58513 81 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 ZNF329Q86UD4 541 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 POLR3KQ9Y2Y1 108 aaPredicted RBP12.13□□□□□ -0.47
CHD4-201ENST00000357008 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 FOXL2NBQ6ZUU3 175 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 HTN3P15516 51 aa12.13□□□□□ -0.47
CHD4-201ENST00000357008 SSBP2P81877 361 aaPredicted RBP12.13□□□□□ -0.47
CHD4-201ENST00000357008 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms