RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 CTHRC1Q96CG8 243 aa9.82□□□□□ -0.84
TRAF3-201ENST00000347662 MESP1Q9BRJ9 268 aa9.82□□□□□ -0.84
TRAF3-201ENST00000347662 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-201ENST00000347662 CACNA1AO00555 2505 aa9.82□□□□□ -0.84
TRAF3-201ENST00000347662 MYO18BQ8IUG5 2567 aa9.82□□□□□ -0.84
TRAF3-201ENST00000347662 GAS1P54826 345 aa9.82□□□□□ -0.84
TRAF3-201ENST00000347662 PLEKHB2Q96CS7 222 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 SEC61GP60059 68 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 FAM166AQ6J272 317 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 RSPO3Q9BXY4 272 aaPredicted RBP9.81□□□□□ -0.84
TRAF3-201ENST00000347662 TICRRQ7Z2Z1 1910 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 ZCCHC24Q8N2G6 241 aaKnown RBP9.81□□□□□ -0.84
TRAF3-201ENST00000347662 DMRT1Q9Y5R6 373 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 RIPPLY2Q5TAB7 128 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 RNF125Q96EQ8 232 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 MIXL1Q9H2W2 232 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A7PA6NKC0 464 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A22PA8MWA6 464 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A12PA8MX19 464 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A23PA8MXZ1 464 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 PMVKQ15126 192 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 CECR9P0C854 216 aa9.81□□□□□ -0.84
TRAF3-201ENST00000347662 LYNX1G3V0Z9 82 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 OVOL1O14753 267 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 LYNX1P0DP58 116 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 RPL15P61313 204 aaKnown RBP9.8□□□□□ -0.84
TRAF3-201ENST00000347662 NDPQ00604 133 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 C9orf106Q8NAJ2 232 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 A0A0G2JMZ2 1700 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 LRRC37A2A6NM11 1700 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 SPSB3Q6PJ21 355 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 GZMMP51124 257 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 PLSCR4Q9NRQ2 329 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 NOTCH4Q99466 2003 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 F2Z2F3 143 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 TGFBR3LH3BV60 316 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 DMRTC2Q8IXT2 367 aaPredicted RBP9.8□□□□□ -0.84
TRAF3-201ENST00000347662 SAXO1Q8IYX7 474 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A10PA6NDY2 464 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A8PA6NJQ4 464 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 SRRM4A7MD48 611 aaKnown RBP9.8□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A13PP0C7W8 464 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A24PP0C7X0 464 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 RNF114Q9Y508 228 aa9.8□□□□□ -0.84
TRAF3-201ENST00000347662 E9PQ18 207 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 SCRT2Q9NQ03 307 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 LAMTOR2Q9Y2Q5 125 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 MYMXA0A1B0GTQ4 84 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 CCL3L1P16619 93 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 C1QTNF4Q9BXJ3 329 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 CSPG4Q6UVK1 2322 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 THBDP07204 575 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 DANCRP0C864 163 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 PSG8Q9UQ74 426 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 LIMS1P48059 325 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 ID3Q02535 119 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 PTPRDP23468 1912 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 NBL1P41271 181 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 C8orf31Q8N9H6 132 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 LRRK1Q38SD2 2015 aa9.79□□□□□ -0.84
TRAF3-201ENST00000347662 C17orf98A8MV24 154 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 ATP5IP56385 69 aaPredicted RBP9.78□□□□□ -0.84
TRAF3-201ENST00000347662 TMEM187Q14656 261 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 CD5P06127 495 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 CSTL1Q9H114 145 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 C9JAW5 83 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 RBM3P98179 157 aaKnown RBP9.78□□□□□ -0.84
TRAF3-201ENST00000347662 C15orf61A6NNL5 157 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 PRCDQ00LT1 54 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 UBL5Q9BZL1 73 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 C5orf66Q9H5L9 145 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 IGLV1-36A0A0B4J1U3 117 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 SERF1AO75920 110 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 CELA3BP08861 270 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
TRAF3-201ENST00000347662 VCYO14598 125 aa9.78□□□□□ -0.84
TRAF3-201ENST00000347662 NXPH4O95158 308 aa9.77□□□□□ -0.84
TRAF3-201ENST00000347662 MAJINQ3KP22 176 aa9.77□□□□□ -0.84
TRAF3-201ENST00000347662 PRR31Q5SQ13 230 aa9.77□□□□□ -0.84
TRAF3-201ENST00000347662 MRPL14Q6P1L8 145 aaKnown RBP9.77□□□□□ -0.84
TRAF3-201ENST00000347662 CLPSL2Q6UWE3 100 aa9.77□□□□□ -0.84
TRAF3-201ENST00000347662 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 RNASE6Q93091 150 aaKnown RBP9.77□□□□□ -0.85
TRAF3-201ENST00000347662 C14orf132Q9NPU4 83 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 TNCP24821 2201 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 A0A087WWL8 130 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 MPTX1A8MV57 137 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 PYYP10082 97 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 ZFP36L1Q07352 338 aaKnown RBP9.77□□□□□ -0.85
TRAF3-201ENST00000347662 TRACP01848 142 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
TRAF3-201ENST00000347662 RMI2Q96E14 147 aa9.77□□□□□ -0.85
TRAF3-201ENST00000347662 SLC25A39Q9BZJ4 359 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms