RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 TMEM30BQ3MIR4 351 aa12.57□□□□□ -0.4
LRP8-202ENST00000347547 ZCCHC24Q8N2G6 241 aaKnown RBP12.57□□□□□ -0.4
LRP8-202ENST00000347547 RBMXL3Q8N7X1 1067 aaKnown RBP12.57□□□□□ -0.4
LRP8-202ENST00000347547 ZNRF1Q8ND25 227 aa12.57□□□□□ -0.4
LRP8-202ENST00000347547 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
LRP8-202ENST00000347547 THYN1Q9P016 225 aa12.57□□□□□ -0.4
LRP8-202ENST00000347547 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 PPIAL4CA0A0B4J2A2 164 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 A0A1B0GV72 72 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 PPIAL4FP0DN26 164 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 COL8A1P27658 744 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 Q86TA4 180 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 OSR1Q8TAX0 266 aaPredicted RBP12.56□□□□□ -0.4
LRP8-202ENST00000347547 BLNKQ8WV28 456 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 PLSCR4Q9NRQ2 329 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 INSIG2Q9Y5U4 225 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 LYZL6O75951 148 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 SAMD5Q5TGI4 173 aa12.56□□□□□ -0.4
LRP8-202ENST00000347547 C6orf15Q6UXA7 325 aaPredicted RBP12.56□□□□□ -0.4
LRP8-202ENST00000347547 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 GP9P14770 177 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 HOXC12P31275 282 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 TMEM190Q8WZ59 177 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 CDX4O14627 284 aaPredicted RBP12.55□□□□□ -0.4
LRP8-202ENST00000347547 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 CT45A10P0DMU9 189 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 HOXB4P17483 251 aaPredicted RBP12.55□□□□□ -0.4
LRP8-202ENST00000347547 FABP6P51161 128 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 SUB1P53999 127 aaKnown RBP eCLIP12.55□□□□□ -0.4
LRP8-202ENST00000347547 PSMG4Q5JS54 123 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 PIFOQ8TCI5 191 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 RAB37Q96AX2 223 aa12.55□□□□□ -0.4
LRP8-202ENST00000347547 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
LRP8-202ENST00000347547 IGHV3OR15-7A0A075B7D8 119 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 PLAUP00749 431 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 CD59P13987 128 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 MEOX1P50221 254 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 FOXI2Q6ZQN5 318 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 Q9H3A6 140 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 FAM186AA6NE01 2351 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 AGFG2O95081 481 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 MEF2CQ06413 473 aaPredicted RBP12.54□□□□□ -0.4
LRP8-202ENST00000347547 OR8A1Q8NGG7 326 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 SELENOKQ9Y6D0 94 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 U3KQK5 164 aa12.54□□□□□ -0.4
LRP8-202ENST00000347547 KLK10O43240 276 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 RPL24P83731 157 aaKnown RBP12.53□□□□□ -0.4
LRP8-202ENST00000347547 CD300EQ496F6 205 aaPredicted RBP12.53□□□□□ -0.4
LRP8-202ENST00000347547 ZNF493Q6ZR52 646 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 Q6ZT83 130 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 ATP6V0BQ99437 205 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 SIGLEC8Q9NYZ4 499 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 HIGD1BQ9P298 99 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 CACNA1HO95180 2353 aa12.53□□□□□ -0.4
LRP8-202ENST00000347547 C22orf46C9J442 243 aa12.52□□□□□ -0.4
LRP8-202ENST00000347547 LHBP01229 141 aa12.52□□□□□ -0.4
LRP8-202ENST00000347547 IGLV2-11P01706 119 aa12.52□□□□□ -0.4
LRP8-202ENST00000347547 ARMS2P0C7Q2 107 aa12.52□□□□□ -0.4
LRP8-202ENST00000347547 Q6AWC8 147 aa12.52□□□□□ -0.4
LRP8-202ENST00000347547 CD46P15529 392 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 WT1-ASQ06250 92 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 ZNF833PQ6ZTB9 187 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
LRP8-202ENST00000347547 TMEM167AQ8TBQ9 72 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 TRGV9Q99603 122 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 VGLL1Q99990 258 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 GTSF1LQ9H1H1 148 aa12.52□□□□□ -0.41
LRP8-202ENST00000347547 MRPL36Q9P0J6 103 aaKnown RBP12.52□□□□□ -0.41
LRP8-202ENST00000347547 GOSR1O95249 250 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 CECR9P0C854 216 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 ORM2P19652 201 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
LRP8-202ENST00000347547 CACNG7P62955 275 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 CIARTQ8N365 385 aaPredicted RBP12.51□□□□□ -0.41
LRP8-202ENST00000347547 SPATA25Q9BR10 227 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 SPRR3Q9UBC9 169 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 RPUSD1Q9UJJ7 312 aaKnown RBP12.51□□□□□ -0.41
LRP8-202ENST00000347547 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 CGB1A6NKQ9 187 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 E7EUB6 86 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 CRYGCP07315 174 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 PAX8Q06710 450 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 TMEM164Q5U3C3 297 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 TMEM116Q8NCL8 245 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 HARBI1Q96MB7 349 aa12.51□□□□□ -0.41
LRP8-202ENST00000347547 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 ZNF785A8K8V0 405 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 KLRC4-KLRK1H3BQV0 150 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 IGLV1-44P01699 117 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 FAM106CPP0CH98 169 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 LOXL1Q08397 574 aaPredicted RBP12.5□□□□□ -0.41
LRP8-202ENST00000347547 FAM106AQ4KMX7 169 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
LRP8-202ENST00000347547 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms