RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 Q9H3A6 140 aa12.96□□□□□ -0.33
SCARB1-202ENST00000339570 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.96□□□□□ -0.34
SCARB1-202ENST00000339570 MRPL32Q9BYC8 188 aaKnown RBP12.96□□□□□ -0.34
SCARB1-202ENST00000339570 RAB9BQ9NP90 201 aa12.96□□□□□ -0.34
SCARB1-202ENST00000339570 CR1LQ2VPA4 569 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 OR4C13Q8NGP0 309 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 RPP21Q9H633 154 aaKnown RBP12.95□□□□□ -0.34
SCARB1-202ENST00000339570 ATRXP46100 2492 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 PSMB11A5LHX3 300 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-202ENST00000339570 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 FAM215AQ9Y5M1 114 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 COL27A1Q8IZC6 1860 aaPredicted RBP12.95□□□□□ -0.34
SCARB1-202ENST00000339570 FCN3O75636 299 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 CD40P25942 277 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 SUB1P53999 127 aaKnown RBP eCLIP12.95□□□□□ -0.344e-6■■■■■ 28.5
SCARB1-202ENST00000339570 TIMM23BQ5SRD1 257 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
SCARB1-202ENST00000339570 GAL3ST2Q9H3Q3 398 aa12.95□□□□□ -0.34
SCARB1-202ENST00000339570 HSBP1L1C9JCN9 74 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 COX19Q49B96 90 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 OSR1Q8TAX0 266 aaPredicted RBP12.94□□□□□ -0.34
SCARB1-202ENST00000339570 GPR82Q96P67 336 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 OR8A1Q8NGG7 326 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 FAM222BQ8WU58 562 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 PERPQ96FX8 193 aa12.94□□□□□ -0.34
SCARB1-202ENST00000339570 COL12A1Q99715 3063 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 IGHV2-26A0A0B4J1V2 119 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 ZNF883P0CG24 379 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 IGHV3-35A0A0C4DH35 117 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 PSG1P11464 419 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 KLF17Q5JT82 389 aaPredicted RBP12.93□□□□□ -0.34
SCARB1-202ENST00000339570 ZADH2Q8N4Q0 377 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 VPS25Q9BRG1 176 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 A8MWL6 223 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 LDLRAD2Q5SZI1 272 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 OR4F17Q8NGA8 305 aa12.93□□□□□ -0.34
SCARB1-202ENST00000339570 MRPL27Q9P0M9 148 aaKnown RBP12.93□□□□□ -0.34
SCARB1-202ENST00000339570 SYS1-DBNDD2H3BUS1 97 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 MUC15Q8N387 334 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 CACNG8Q8WXS5 425 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 LINC00312Q9Y6C7 94 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 LOC105371242A0A075B767 164 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 M0R296 226 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 NDUFB3O43676 98 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 CFHR2P36980 270 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 POU2AF1Q16633 256 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 C19orf24Q9BVV8 132 aa12.92□□□□□ -0.34
SCARB1-202ENST00000339570 M0R3E3 92 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 VMA21Q3ZAQ7 101 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 C22orf15Q8WYQ4 148 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 DYNLRB1Q9NP97 96 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 IGLC7A0M8Q6 106 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 FAM106CPP0CH98 169 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 FAM106AQ4KMX7 169 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 PPIAL4DF5H284 164 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 CNIH1O95406 144 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 BSPH1Q075Z2 132 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 ZNF833PQ6ZTB9 187 aa12.91□□□□□ -0.34
SCARB1-202ENST00000339570 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 APOHP02749 345 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-202ENST00000339570 TCRAP04437 139 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 TNFRSF1AP19438 455 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 TM4SF20Q53R12 229 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 ORAOV1Q8WV07 137 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 RPL27AP46776 148 aaKnown RBP12.9□□□□□ -0.34
SCARB1-202ENST00000339570 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 PRSS3P2Q8NHM4 247 aa12.9□□□□□ -0.34
SCARB1-202ENST00000339570 IGLV3-9A0A075B6K5 115 aa12.9□□□□□ -0.35
SCARB1-202ENST00000339570 PNKDQ8N490 385 aa12.9□□□□□ -0.35
SCARB1-202ENST00000339570 OR5AN1Q8NGI8 311 aa12.9□□□□□ -0.35
SCARB1-202ENST00000339570 CTSZQ9UBR2 303 aa12.9□□□□□ -0.35
SCARB1-202ENST00000339570 HILPDAQ9Y5L2 63 aa12.9□□□□□ -0.35
SCARB1-202ENST00000339570 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.35
SCARB1-202ENST00000339570 MAP1LC3CQ9BXW4 147 aa12.89□□□□□ -0.35
SCARB1-202ENST00000339570 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
SCARB1-202ENST00000339570 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
SCARB1-202ENST00000339570 NCR2O95944 276 aa12.89□□□□□ -0.35
SCARB1-202ENST00000339570 LRRC10Q5BKY1 277 aa12.89□□□□□ -0.35
SCARB1-202ENST00000339570 MRPL52Q86TS9 123 aaKnown RBP12.89□□□□□ -0.35
SCARB1-202ENST00000339570 RAB37Q96AX2 223 aa12.89□□□□□ -0.35
SCARB1-202ENST00000339570 IGHV1-69-2A0A0G2JMI3 117 aa12.88□□□□□ -0.35
SCARB1-202ENST00000339570 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
SCARB1-202ENST00000339570 TMEM167AQ8TBQ9 72 aa12.88□□□□□ -0.35
SCARB1-202ENST00000339570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.88□□□□□ -0.35
SCARB1-202ENST00000339570 RBX1P62877 108 aa12.88□□□□□ -0.35
SCARB1-202ENST00000339570 RBPMS2Q6ZRY4 209 aaKnown RBP12.88□□□□□ -0.35
SCARB1-202ENST00000339570 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
SCARB1-202ENST00000339570 VSTM2AQ8TAG5 236 aa12.88□□□□□ -0.35
SCARB1-202ENST00000339570 TMEM191AQ9H0A3 160 aa12.88□□□□□ -0.35
SCARB1-202ENST00000339570 TMEM265A0A087WTH1 108 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms