RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 IGHV1-46P01743 117 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 TMEM200BQ69YZ2 307 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 F2Z2F3 143 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 EFNB3Q15768 340 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 RASL10AQ92737 203 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
SHANK2-201ENST00000338508 ZFAND6Q6FIF0 208 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 SYNJ2BPP57105 145 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 ZNF497Q6ZNH5 498 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 LINC00518Q8N0U6 118 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 EREGO14944 169 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 PRIMA1Q86XR5 153 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 PINLYPA6NC86 204 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 MBD3L4A6NDZ8 208 aaPredicted RBP9.71□□□□□ -0.85
SHANK2-201ENST00000338508 MBD3L3A6NE82 208 aaPredicted RBP9.71□□□□□ -0.85
SHANK2-201ENST00000338508 MBD3L5A6NJ08 208 aaPredicted RBP9.71□□□□□ -0.85
SHANK2-201ENST00000338508 DTX1Q86Y01 620 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 MBD3L2Q8NHZ7 208 aaPredicted RBP9.71□□□□□ -0.85
SHANK2-201ENST00000338508 TM2D1Q9BX74 207 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 GSN-AS1Q9NRJ2 163 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 PLCE1Q9P212 2302 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 XCL2Q9UBD3 114 aa9.71□□□□□ -0.85
SHANK2-201ENST00000338508 TET1Q8NFU7 2136 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 A0A1W2PR77 199 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 ZNF236Q9UL36 1845 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 PRB2P02812 416 aaPredicted RBP9.71□□□□□ -0.86
SHANK2-201ENST00000338508 CCL20P78556 96 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 GAGE2BQ13066 116 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 PCNX2A6NKB5 2137 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 DAD1P61803 113 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.86
SHANK2-201ENST00000338508 PSG1P11464 419 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 UCP1P25874 307 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 CTHRC1Q96CG8 243 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 STRCP1A6NGW2 1772 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 DKK1O94907 266 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 RUSC1-AS1Q66K80 236 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 hDV102S1A0JD36 115 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 H3BMM0 161 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 SRSF3P84103 164 aaKnown RBP9.7□□□□□ -0.86
SHANK2-201ENST00000338508 PRCDQ00LT1 54 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 SPATA31B1PQ5VZV4 182 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 LY75O60449 1722 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 DLEC1Q9Y238 1755 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 DOCK4Q8N1I0 1966 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 TEX38Q6PEX7 206 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 BMPERQ8N8U9 685 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 WBP1Q96G27 269 aa9.7□□□□□ -0.86
SHANK2-201ENST00000338508 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 GAGE12JA6NER3 117 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 GAGE1Q13065 139 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 GAGE4Q13068 117 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 GAGE5Q13069 117 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 CD5LO43866 347 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 MDS2Q8NDY4 140 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 A0A087X0K7 114 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 VSIRQ9H7M9 311 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 CACNA1EQ15878 2313 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 CMC4P56277 68 aaPredicted RBP9.69□□□□□ -0.86
SHANK2-201ENST00000338508 DEFB131AP59861 70 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 FGFBP3Q8TAT2 258 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 C18orf12Q96KH6 178 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 COL4A5P29400 1685 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 PSME4Q14997 1843 aa9.69□□□□□ -0.86
SHANK2-201ENST00000338508 E9PLN8 166 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 SH2D1AO60880 128 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 NXPH4O95158 308 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 LYZL4Q96KX0 146 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 IGHV1-3A0A0C4DH29 117 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 DSCR9P59020 149 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 LCN12Q6JVE5 192 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 IL17RELQ6ZVW7 336 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 B4DSR2 109 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 BCL6BQ8N143 479 aaPredicted RBP9.68□□□□□ -0.86
SHANK2-201ENST00000338508 RNF114Q9Y508 228 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 COL4A1P02462 1669 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 J3QW42 95 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 ZNF138P52744 262 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 CFHR1Q03591 330 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 HEATR5AQ86XA9 2040 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 TRAV9-2A0A087WT02 112 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 FAM90A1Q86YD7 464 aa9.68□□□□□ -0.86
SHANK2-201ENST00000338508 EFNA4P52798 201 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 TPTE2P1Q5T6R2 138 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 MESP1Q9BRJ9 268 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 UBR3Q6ZT12 1888 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 IGHV3-38A0A0C4DH36 116 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 TIMP3P35625 211 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 Q96MF0 132 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 A0A087WV48 116 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 LINC00587B1AMM8 73 aa9.67□□□□□ -0.86
SHANK2-201ENST00000338508 DUTP33316 252 aaKnown RBP9.67□□□□□ -0.86
SHANK2-201ENST00000338508 PMVKQ15126 192 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms