RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CHODLQ9H9P2 273 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 LY96Q9Y6Y9 160 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 ADGRG4Q8IZF6 3080 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 TRBV9A0A0B4J1U6 114 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 A0A1W2PRE2 83 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 IGLC1P0CG04 106 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 MALRD1Q5VYJ5 2156 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 OSR1Q8TAX0 266 aaPredicted RBP13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 DYSFO75923 2080 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 IGLV3-9A0A075B6K5 115 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 NDUFB3O43676 98 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 HLA-DQA1P01909 254 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 TNXAQ16473 311 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 EBLN2Q6P2I7 272 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 GTF2H5Q6ZYL4 71 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 PNKDQ8N490 385 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 DYNLRB1Q9NP97 96 aa13.37□□□□□ -0.27
CDC42EP4-201ENST00000335793 PPIAL4CA0A0B4J2A2 164 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 ISLRO14498 428 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 PRB4P10163 310 aaPredicted RBP13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 FOXE3Q13461 319 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 TMEM136Q6ZRR5 245 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 LINC00305Q7Z4B0 112 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 DEFB125Q8N687 156 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 TM4SF5O14894 197 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 SPATA12Q7Z6I5 190 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 OR4C13Q8NGP0 309 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 OR8B2Q96RD0 313 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 C19orf24Q9BVV8 132 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 PEF1Q9UBV8 284 aaKnown RBP13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 LINC00312Q9Y6C7 94 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 IGF2RP11717 2491 aa13.36□□□□□ -0.27
CDC42EP4-201ENST00000335793 PPIAL4EA0A075B759 164 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 PGPA6NDG6 321 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 PPIAL4FP0DN26 164 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 Q0VG73 95 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 IGFL2Q6UWQ7 119 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 FAM169BQ8N8A8 192 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 OR1L4Q8NGR5 311 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 ZNF835Q9Y2P0 537 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 PTPRBP23467 1997 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 KLK10O43240 276 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 PDPNQ86YL7 162 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 OR4C46A6NHA9 309 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 BMPR1BO00238 502 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 DLX1P56177 255 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 SLAQ13239 276 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 POU2AF1Q16633 256 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 SIGMAR1Q99720 223 aa13.35□□□□□ -0.27
CDC42EP4-201ENST00000335793 H0YJW9 148 aa13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 TMEM200BQ69YZ2 307 aa13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 VSTM2AQ8TAG5 236 aa13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 SPTBN1Q01082 2364 aaKnown RBP13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 GATA4P43694 442 aa13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 WT1-ASQ06250 92 aa13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 CACNG8Q8WXS5 425 aa13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 MRPL27Q9P0M9 148 aaKnown RBP13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 ANKRD11Q6UB99 2663 aaPredicted RBP13.34□□□□□ -0.27
CDC42EP4-201ENST00000335793 PEX7O00628 323 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 VMA21Q3ZAQ7 101 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 TMEM177Q53S58 311 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 C19orf35Q6ZS72 473 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 DAZAP1Q96EP5 407 aaKnown RBP13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 SLC25A2Q9BXI2 301 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 NDUFA4L2Q9NRX3 87 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 TNFRSF19Q9NS68 423 aa13.33□□□□□ -0.27
CDC42EP4-201ENST00000335793 SMG1Q96Q15 3661 aaKnown RBP13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 CACNA1BQ00975 2339 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 K7EM74 188 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 ARF6P62330 175 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 COX19Q49B96 90 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 SLC25A34Q6PIV7 304 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 FAM222BQ8WU58 562 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 IZUMO1RA6ND01 250 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 VSTM5A8MXK1 200 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 C16orf97H3BN30 126 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
CDC42EP4-201ENST00000335793 C17orf100A8MU93 164 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 HIGD1CA8MV81 97 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 K7EQM0 130 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 PRRG2O14669 202 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 PLGLAQ15195 96 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 TBR1Q16650 682 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 TEX48A0A1B0GUV7 120 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 FOXA3P55318 350 aaPredicted RBP13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 ZNF48Q96MX3 618 aaPredicted RBP13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 TPSG1Q9NRR2 321 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 TSSC4Q9Y5U2 329 aaPredicted RBP13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 AKAP13Q12802 2813 aa13.32□□□□□ -0.28
CDC42EP4-201ENST00000335793 FAM181BA6NEQ2 426 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 ZNF137PP52743 207 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 BSPH1Q075Z2 132 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 SHISA2Q6UWI4 295 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 LINC00173Q6ZV60 143 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 OR8B3Q8NGG8 313 aa13.31□□□□□ -0.28
CDC42EP4-201ENST00000335793 SS18L2Q9UHA2 77 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms