RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 OR4F17Q8NGA8 305 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 IGF2RP11717 2491 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 TAX1BP3O14907 124 aa11.5□□□□□ -0.57
PABPC1-201ENST00000318607 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
PABPC1-201ENST00000318607 TMEM265A0A087WTH1 108 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 GNG7O60262 68 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 CYC1P08574 325 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 COX7A1P24310 79 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 CD69Q07108 199 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 BVES-AS1Q5T3Y7 98 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 RITA1Q96K30 269 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 M0R3E3 92 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 NCR2O95944 276 aa11.49□□□□□ -0.57
PABPC1-201ENST00000318607 RPUSD1Q9UJJ7 312 aaKnown RBP11.49□□□□□ -0.57
PABPC1-201ENST00000318607 RNASE2P10153 161 aaKnown RBP11.48□□□□□ -0.57
PABPC1-201ENST00000318607 PPIFP30405 207 aaKnown RBP11.48□□□□□ -0.57
PABPC1-201ENST00000318607 WT1-ASQ06250 92 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 INO80CQ6PI98 192 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-201ENST00000318607 FDCSPQ8NFU4 85 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 GTSF1Q8WW33 167 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 C11orf52Q96A22 123 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 UPK2O00526 184 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 GPR183P32249 361 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 CFHR2P36980 270 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 PATE2Q6UY27 113 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 Q6ZT83 130 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 ZNF329Q86UD4 541 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 C17orf77Q96MU5 243 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 TMEM14BQ9NUH8 114 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 MRPS16Q9Y3D3 137 aaKnown RBP11.48□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.48□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 ARMS2P0C7Q2 107 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 GCSHP23434 173 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 KIR2DL2P43627 348 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-201ENST00000318607 GUSBP1Q15486 140 aa11.48□□□□□ -0.57
PABPC1-201ENST00000318607 A8MWL6 223 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 ESDP10768 282 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 CNTFRP26992 372 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 FAM27E3Q08E93 113 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 C17orf58Q2M2W7 97 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 KLF17Q5JT82 389 aaPredicted RBP11.47□□□□□ -0.57
PABPC1-201ENST00000318607 WDR31Q8NA23 367 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 OR1L8Q8NGR8 309 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 EPDR1Q9UM22 224 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 PROCRQ9UNN8 238 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 COL5A1P20908 1838 aaPredicted RBP11.47□□□□□ -0.57
PABPC1-201ENST00000318607 WT1P19544 449 aaPredicted RBP11.47□□□□□ -0.57
PABPC1-201ENST00000318607 C1orf210Q8IVY1 113 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 TMEM178AQ8NBL3 297 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 TNRC6AQ8NDV7 1962 aaKnown RBP11.47□□□□□ -0.57
PABPC1-201ENST00000318607 PRCDQ00LT1 54 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
PABPC1-201ENST00000318607 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
PABPC1-201ENST00000318607 AP5S1Q9NUS5 200 aa11.47□□□□□ -0.57
PABPC1-201ENST00000318607 CGB1A6NKQ9 187 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 K7ERU9 68 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 CNIH1O95406 144 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 HLA-DRB1P01911 266 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 CLEC3BP05452 202 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 CACNG7P62955 275 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 STXBP6Q8NFX7 210 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
PABPC1-201ENST00000318607 CRYABP02511 175 aaKnown RBP11.46□□□□□ -0.58
PABPC1-201ENST00000318607 DEFB109BQ30KR1 87 aa11.46□□□□□ -0.58
PABPC1-201ENST00000318607 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.58
PABPC1-201ENST00000318607 IGF2BP2-AS1Q96M15 143 aa11.46□□□□□ -0.58
PABPC1-201ENST00000318607 FER1L6-AS2Q96M78 137 aa11.46□□□□□ -0.58
PABPC1-201ENST00000318607 Q9H3A6 140 aa11.46□□□□□ -0.58
PABPC1-201ENST00000318607 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.58
PABPC1-201ENST00000318607 SRRM5B3KS81 715 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 H0YJW9 148 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-201ENST00000318607 CDKN1BP46527 198 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 TECTAO75443 2155 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 ITGB1BP1O14713 200 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 C12orf54Q6X4T0 127 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 GPR82Q96P67 336 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 CSPG4Q6UVK1 2322 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 TRAV30A0A087WSZ9 112 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 TIMM23BQ5SRD1 257 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 UBALD2Q8IYN6 164 aa11.45□□□□□ -0.58
PABPC1-201ENST00000318607 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-201ENST00000318607 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 DLL1O00548 723 aa11.44□□□□□ -0.58
PABPC1-201ENST00000318607 GTSF1LQ9H1H1 148 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms