RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 J3QRE1 110 aa12.27□□□□□ -0.45
SCN3B-201ENST00000299333 A0A1W2PRX2 142 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 IQCF6A8MYZ5 107 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 TEX43Q6ZNM6 134 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 PIKFYVEQ9Y2I7 2098 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 TRGV11A0A075B6L2 103 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 RPL32P62910 135 aaKnown RBP12.26□□□□□ -0.45
SCN3B-201ENST00000299333 RHOGP84095 191 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 C20orf144Q9BQM9 153 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 FAM90A1Q86YD7 464 aa12.26□□□□□ -0.45
SCN3B-201ENST00000299333 CRYBA4P53673 196 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 CT83Q5H943 113 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 TGFBR3LH3BV60 316 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 SIGLEC12Q96PQ1 595 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 TRAV26-1A0A087WT03 109 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 TCF15Q12870 199 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 Q8NFD4 153 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 SCN2AQ99250 2005 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 SOCS3O14543 225 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 CDK2AP2O75956 126 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 RGPD4Q7Z3J3 1758 aa12.25□□□□□ -0.45
SCN3B-201ENST00000299333 FAM90A9PA6NNJ1 464 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 SH2D1AO60880 128 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 DUSP14O95147 198 aaKnown RBP12.24□□□□□ -0.45
SCN3B-201ENST00000299333 RPL15P61313 204 aaKnown RBP12.24□□□□□ -0.45
SCN3B-201ENST00000299333 ZIC4Q8N9L1 334 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 LEPROTO15243 131 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 LHFPL1Q86WI0 220 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 CCL19Q99731 98 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 TRAV40A0A0B4J280 105 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 COL4A1P02462 1669 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 RS1O15537 224 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 SIGLEC15Q6ZMC9 328 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 RASL10AQ92737 203 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 INS-IGF2F8WCM5 200 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 INSP01308 110 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 SMRP1Q8NCR6 262 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
SCN3B-201ENST00000299333 SLC25A39Q9BZJ4 359 aaPredicted RBP12.24□□□□□ -0.45
SCN3B-201ENST00000299333 IGHV1-2P23083 117 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 BSPH1Q075Z2 132 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 NRN1LQ496H8 165 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 C10orf55Q5SWW7 151 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 MYOD1P15172 320 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 SPXQ9BT56 116 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 OVOL1O14753 267 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 HAMPP81172 84 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 Q8TAT8 98 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 LY96Q9Y6Y9 160 aa12.23□□□□□ -0.45
SCN3B-201ENST00000299333 TMEM243Q9BU79 118 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 U3KQE9 123 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 DIDO1Q9BTC0 2240 aaKnown RBP12.22□□□□□ -0.45
SCN3B-201ENST00000299333 PRB1P04280 392 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 TIMM21Q9BVV7 248 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 TMEM133Q9H2Q1 129 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 ATAD5Q96QE3 1844 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 PPP1R32Q7Z5V6 425 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 C3orf56Q8N813 242 aa12.22□□□□□ -0.45
SCN3B-201ENST00000299333 THSD7AQ9UPZ6 1657 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 C14orf178Q8N769 122 aaPredicted RBP12.21□□□□□ -0.45
SCN3B-201ENST00000299333 SAP25Q8TEE9 199 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 IGKV1-12A0A0C4DH73 117 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 VCYO14598 125 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 IGKV1D-12P01611 117 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 PRB2P02812 416 aaPredicted RBP12.21□□□□□ -0.45
SCN3B-201ENST00000299333 COLCA1Q6ZS62 124 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 SEC16AO15027 2179 aa12.21□□□□□ -0.45
SCN3B-201ENST00000299333 CLPSL1A2RUU4 121 aa12.21□□□□□ -0.46
SCN3B-201ENST00000299333 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
SCN3B-201ENST00000299333 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.46
SCN3B-201ENST00000299333 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.46
SCN3B-201ENST00000299333 NMSQ5H8A3 153 aa12.21□□□□□ -0.46
SCN3B-201ENST00000299333 UBL5Q9BZL1 73 aa12.21□□□□□ -0.46
SCN3B-201ENST00000299333 UTF1Q5T230 341 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
SCN3B-201ENST00000299333 A0A0U1RQV1 116 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 C9JQL5 133 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 IGKV1-5P01602 117 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 GAS1P54826 345 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 PTPRFP10586 1907 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 A0A1W2PPM0 123 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 C17orf100A8MU93 164 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 PAX8Q06710 450 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 Q0VG73 95 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 KNCNA6PVL3 124 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 H3BMG7 143 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
SCN3B-201ENST00000299333 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
SCN3B-201ENST00000299333 UNC13CQ8NB66 2214 aa12.2□□□□□ -0.46
SCN3B-201ENST00000299333 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms