RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 MLNRO43193 412 aa13.15□□□□□ -0.3
ARHGEF28-201ENST00000296794 WNT2P09544 360 aa13.15□□□□□ -0.3
ARHGEF28-201ENST00000296794 CIRBPQ14011 172 aaKnown RBP13.15□□□□□ -0.3
ARHGEF28-201ENST00000296794 C10orf91Q5T1B1 145 aa13.15□□□□□ -0.3
ARHGEF28-201ENST00000296794 FNDC4Q9H6D8 234 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF28-201ENST00000296794 NBL1P41271 181 aa13.15□□□□□ -0.31
ARHGEF28-201ENST00000296794 JKAMPQ9P055 326 aa13.15□□□□□ -0.31
ARHGEF28-201ENST00000296794 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 PLA2G2CQ5R387 149 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 HEATR5AQ86XA9 2040 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 C2orf88Q9BSF0 95 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 EXOC3-AS1Q8N2X6 119 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 SLC50A1Q9BRV3 221 aa13.14□□□□□ -0.31
ARHGEF28-201ENST00000296794 FER1L5A0AVI2 2057 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 TMEM200BQ69YZ2 307 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 RASL11AQ6T310 242 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 NHP2Q9NX24 153 aaKnown RBP13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 PSG1P11464 419 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 PAX9P55771 341 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 APOMO95445 188 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 SCRT1Q9BWW7 348 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 CUL9Q8IWT3 2517 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 WIPF3A6NGB9 483 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 TCRAP04437 139 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 NUP35Q8NFH5 326 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 TMEM167AQ8TBQ9 72 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
ARHGEF28-201ENST00000296794 DLEU1O43261 78 aa13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 PPBPP02775 128 aa13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 TMEM178BH3BS89 294 aa13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 TYMSP04818 313 aa13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 IFI27L1Q96BM0 104 aa13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 MBNL3Q9NUK0 354 aaKnown RBP13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 ORAOV1Q8WV07 137 aa13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
ARHGEF28-201ENST00000296794 DOCK10Q96BY6 2186 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 SLX1AQ9BQ83 275 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 EVI2AP22794 236 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 RHOGP84095 191 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 LDLRAD2Q5SZI1 272 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 IGHV2-26A0A0B4J1V2 119 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 H0YJW9 148 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 DPM2O94777 84 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 SLC25A39Q9BZJ4 359 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 NPIPB5A8MRT5 1133 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 TTC32Q5I0X7 151 aa13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 ZNF474Q6S9Z5 364 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF28-201ENST00000296794 H7C1H1 209 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 NPFFO15130 113 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 SLC25A16P16260 332 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 C11orf44Q8N8P7 122 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 TRGV9Q99603 122 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 GAFA1Q96PS6 74 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 MOB4Q9Y3A3 225 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 MLANAQ16655 118 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 SP5Q6BEB4 398 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 DPH3Q96FX2 82 aa13.1□□□□□ -0.31
ARHGEF28-201ENST00000296794 OOSP1A8MZH6 123 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 COPS9Q8WXC6 57 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 MEGF9Q9H1U4 602 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 TNFRSF18Q9Y5U5 241 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 SUMO2P61956 95 aaKnown RBP13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 SRSF1Q07955 248 aaKnown RBP eCLIP13.09□□□□□ -0.312e-8■□□□□ 10.4
ARHGEF28-201ENST00000296794 ZNF726P1Q15940 193 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 DMRTC2Q8IXT2 367 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 PLXNA2O75051 1894 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 IGKV2-40A0A087WW87 121 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 IGKV2D-40P01614 121 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 GLMPQ8WWB7 406 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 DUX3Q96PT4 197 aa13.09□□□□□ -0.31
ARHGEF28-201ENST00000296794 RNASE2P10153 161 aaKnown RBP13.08□□□□□ -0.31
ARHGEF28-201ENST00000296794 PAX1P15863 534 aa13.08□□□□□ -0.31
ARHGEF28-201ENST00000296794 SEC11AP67812 179 aa13.08□□□□□ -0.31
ARHGEF28-201ENST00000296794 RSPO1Q2MKA7 263 aaPredicted RBP13.08□□□□□ -0.31
ARHGEF28-201ENST00000296794 A0A1B0GUS0 222 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 A0A1B0GWJ7 208 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 D6R8Y8 96 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 EREGO14944 169 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 MINOS1Q5TGZ0 78 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 MRPL27Q9P0M9 148 aaKnown RBP13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 MINOS1-NBL1R4GNA1 71 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 hDV102S1A0JD36 115 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 A8MWP6 167 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 IGHV1-3A0A0C4DH29 117 aa13.08□□□□□ -0.32
ARHGEF28-201ENST00000296794 NCR2O95944 276 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms