RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 SPACA3Q8IXA5 215 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 CST9LQ9H4G1 147 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 TCRBV4S1A1TA0A5B7 111 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 SRRM5B3KS81 715 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
USP43-201ENST00000285199 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.35
USP43-201ENST00000285199 NAV3Q8IVL0 2385 aa12.83□□□□□ -0.35
USP43-201ENST00000285199 TMEM265A0A087WTH1 108 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 KIR2DL5BA0A0G2JN68 375 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 KIR2DL5BA0A0G2JPC4 375 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 M0R381 172 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 KIR2DL5AQ8N109 375 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 ST20Q9HBF5 79 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 JKAMPQ9P055 326 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 ORMDL3Q8N138 153 aa12.83□□□□□ -0.36
USP43-201ENST00000285199 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
USP43-201ENST00000285199 TLN1Q9Y490 2541 aaKnown RBP12.83□□□□□ -0.36
USP43-201ENST00000285199 D6R8Y8 96 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 CD3EP07766 207 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 LGALS7P47929 136 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 RPUSD1Q9UJJ7 312 aaKnown RBP12.82□□□□□ -0.36
USP43-201ENST00000285199 AHRRA9YTQ3 701 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 HIST1H1AQ02539 215 aaPredicted RBP12.82□□□□□ -0.36
USP43-201ENST00000285199 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 TMEM186Q96B77 213 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 PRSS2P07478 247 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 PSG9Q00887 426 aa12.82□□□□□ -0.36
USP43-201ENST00000285199 J3QW42 95 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 IGKV3-15P01624 115 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 PPIAL4CA0A0B4J2A2 164 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 PPIAL4GP0DN37 164 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 CEACAM3P40198 252 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 OCIAD2Q56VL3 154 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 Q6ZR03 302 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 LINC00173Q6ZV60 143 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 Q8TAT8 98 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 SONP18583 2426 aaKnown RBP12.81□□□□□ -0.36
USP43-201ENST00000285199 LEPP41159 167 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 SAMD13Q5VXD3 122 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 UBTD1Q9HAC8 227 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 MMP23AO75900 390 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 TMEM78Q5T7P6 136 aa12.81□□□□□ -0.36
USP43-201ENST00000285199 A0A0G2JLM5 398 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 ARMS2P0C7Q2 107 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 BMI1P35226 326 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 RABAC1Q9UI14 185 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 VDAC2P45880 294 aaPredicted RBP12.8□□□□□ -0.36
USP43-201ENST00000285199 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 ZNF106Q9H2Y7 1883 aaKnown RBP12.8□□□□□ -0.36
USP43-201ENST00000285199 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 FAM231BA6NCW3 169 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 IFI27P40305 119 aaPredicted RBP12.8□□□□□ -0.36
USP43-201ENST00000285199 AMN1Q8IY45 258 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
USP43-201ENST00000285199 PET117Q6UWS5 81 aa12.79□□□□□ -0.36
USP43-201ENST00000285199 FMC1Q96HJ9 113 aa12.79□□□□□ -0.36
USP43-201ENST00000285199 TCRAP04437 139 aa12.79□□□□□ -0.36
USP43-201ENST00000285199 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
USP43-201ENST00000285199 NTN3O00634 580 aaPredicted RBP12.79□□□□□ -0.36
USP43-201ENST00000285199 IGKV3-20P01619 116 aa12.79□□□□□ -0.36
USP43-201ENST00000285199 EBLN2Q6P2I7 272 aa12.79□□□□□ -0.36
USP43-201ENST00000285199 IGHV3OR16-10A0A075B7F0 116 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 IGKV2-40A0A087WW87 121 aaPredicted RBP12.78□□□□□ -0.36
USP43-201ENST00000285199 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 IGKV2D-40P01614 121 aaPredicted RBP12.78□□□□□ -0.36
USP43-201ENST00000285199 CFHR2P36980 270 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 BCL6BQ8N143 479 aaPredicted RBP12.78□□□□□ -0.36
USP43-201ENST00000285199 OR11H1Q8NG94 326 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
USP43-201ENST00000285199 MRPS18CQ9Y3D5 142 aaKnown RBP12.78□□□□□ -0.36
USP43-201ENST00000285199 MFAP4P55083 255 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 FER1L6-AS1Q8NA97 138 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 GOSR1O95249 250 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 KIR3DS1Q14943 382 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 FAM74A4Q5TZK3 123 aa12.78□□□□□ -0.36
USP43-201ENST00000285199 CUL9Q8IWT3 2517 aa12.77□□□□□ -0.36
USP43-201ENST00000285199 ZNF295-AS1Q8N0V1 137 aa12.77□□□□□ -0.36
USP43-201ENST00000285199 C16orf92Q96LL3 132 aa12.77□□□□□ -0.36
USP43-201ENST00000285199 MRPS16Q9Y3D3 137 aaKnown RBP12.77□□□□□ -0.36
USP43-201ENST00000285199 COL4A4P53420 1690 aaPredicted RBP12.77□□□□□ -0.36
USP43-201ENST00000285199 SSBP2P81877 361 aaPredicted RBP12.77□□□□□ -0.36
USP43-201ENST00000285199 MORN5Q5VZ52 161 aa12.77□□□□□ -0.36
USP43-201ENST00000285199 TTC9CQ8N5M4 171 aa12.77□□□□□ -0.36
USP43-201ENST00000285199 NUP210Q8TEM1 1887 aaPredicted RBP12.77□□□□□ -0.36
USP43-201ENST00000285199 SRRM4A7MD48 611 aaKnown RBP12.77□□□□□ -0.37
USP43-201ENST00000285199 IGHV1-46P01743 117 aa12.77□□□□□ -0.37
USP43-201ENST00000285199 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
USP43-201ENST00000285199 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.77□□□□□ -0.37
USP43-201ENST00000285199 VKORC1Q9BQB6 163 aa12.77□□□□□ -0.37
USP43-201ENST00000285199 FOXC1Q12948 553 aa12.77□□□□□ -0.37
USP43-201ENST00000285199 LINC01560Q8TB33 94 aa12.77□□□□□ -0.37
USP43-201ENST00000285199 JMJD8Q96S16 334 aa12.77□□□□□ -0.37
USP43-201ENST00000285199 BSPH1Q075Z2 132 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms