RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 MBNL2Q5VZF2 373 aaKnown RBP11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TIMD4Q96H15 378 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 CHODLQ9H9P2 273 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 CTSZQ9UBR2 303 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 BRD3OSQ6XYD6 125 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ZNF788Q6ZQV5 615 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 GCN1Q92616 2671 aaKnown RBP11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 FLNAP21333 2647 aaKnown RBP11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 BSNQ9UPA5 3926 aa11.5□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ISLRO14498 428 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 PAX2Q02962 417 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TMEM147Q9BVK8 224 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 IFI27L2Q9H2X8 130 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 C12orf54Q6X4T0 127 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 C7orf71A4D174 169 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ERHP84090 104 aaKnown RBP11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 PYGO2Q9BRQ0 406 aa11.49□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ITPR3Q14573 2671 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 OR4C46A6NHA9 309 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 IGLL1P15814 213 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 NPPCP23582 126 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 SCO2A0A1W2PP80 73 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 OCC1Q8TAD7 63 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 HES4Q9HCC6 221 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TRAV9-2A0A087WT02 112 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TMSB15BA0A087X1C1 80 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 E7EUB6 86 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 C17orf112F2Z3M2 114 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 LINC00310P59036 64 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 BRWD1-AS2P59051 145 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 CKS1BP61024 79 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 RPL15P61313 204 aaKnown RBP11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 C17orf58Q2M2W7 97 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 NPCDR1Q9BY65 106 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 CDC42EP3Q9UKI2 254 aa11.48□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TRAV8-6A0A0B4J262 113 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 K7EQM0 130 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 PYYP10082 97 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 HIST2H2BCQ6DN03 193 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 WDR73Q6P4I2 378 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 Q8TCH9 128 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TMEM178BH3BS89 294 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 APCSP02743 223 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 AZU1P20160 251 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 UBE2G1P62253 170 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TIGITQ495A1 244 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 OR5B3Q8NH48 314 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 CEACAM3P40198 252 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 MTURNQ8N3F0 131 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 AGMATQ9BSE5 352 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 RAB1BQ9H0U4 201 aa11.47□□□□□ -0.57
TNFRSF11A-201ENST00000269485 AREGP15514 252 aa11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 RAB9AP51151 201 aa11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 RPL8P62917 257 aaKnown RBP11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 ZNF295-AS1Q8N0V1 137 aa11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 KCNS1Q96KK3 526 aa11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 SIGMAR1Q99720 223 aa11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 RNASE7Q9H1E1 156 aaKnown RBP11.46□□□□□ -0.57
TNFRSF11A-201ENST00000269485 COX7A2P2O60397 106 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 CT45A6P0DMU7 189 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 CT45A5P0DMU8 189 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 CT45A7P0DMV0 189 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 MFAP2P55001 183 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 BPIFA4PQ86YQ2 179 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 C15orf65H3BRN8 121 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 HTR1DP28221 377 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 JPT1Q9UK76 154 aa11.46□□□□□ -0.58
TNFRSF11A-201ENST00000269485 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 A0A1W2PS18 150 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 TOMM40O96008 361 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 ESDP10768 282 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 KHDC1LQ5JSQ8 128 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 FAM222BQ8WU58 562 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 VENTXO95231 258 aa11.45□□□□□ -0.58
TNFRSF11A-201ENST00000269485 LINC00869P0C866 280 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms