RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 NDUFS8O00217 210 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 SCGB2A1O75556 95 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 HIST1H1EP10412 219 aaKnown RBP10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 FABP4P15090 132 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 Q56UQ5 140 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 OR8I2Q8N0Y5 310 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 ZNF491Q8N8L2 437 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 OR10D4PQ8NGN7 298 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 RNF125Q96EQ8 232 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 SHANK2-AS3Q9BTD1 123 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 SERTAD4Q9NUC0 356 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 RPH3ALQ9UNE2 315 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 RNF24Q9Y225 148 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 S4R3C0 116 aa10.18□□□□□ -0.78
SPTLC1-201ENST00000262554 WI2-2373I1.2A0A1W2PRP0 233 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 ZNF705GA8MUZ8 300 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 H3BRN7 92 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 IL4P05112 153 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 S100A12P80511 92 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 PAX8Q06710 450 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 BPIFA4PQ86YQ2 179 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 C10orf105Q8TEF2 133 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 TMEM190Q8WZ59 177 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 SMIM12Q96EX1 92 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 OTORQ9NRC9 128 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 C21orf62Q9NYP8 219 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 CENPVL3A0A0U1RRI6 287 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 H3BTX0 84 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 CLEC2AQ6UVW9 174 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 ZNF586Q9NXT0 402 aa10.17□□□□□ -0.78
SPTLC1-201ENST00000262554 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 NDUFB8O95169 186 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 ATP5J2P56134 94 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 OR4F17Q8NGA8 305 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 HIST1H2BLQ99880 126 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 CHRDL1Q9BU40 450 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 ABCA1O95477 2261 aa10.16□□□□□ -0.78
SPTLC1-201ENST00000262554 IGHV4-61A0A0C4DH41 118 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 OR2J3O76001 311 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 TCRAP04437 139 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 CBLN1P23435 193 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 ADMP35318 185 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 IER3P46695 156 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 COX19Q49B96 90 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 FAM110DQ8TAY7 271 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 CMTM2Q8TAZ6 248 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 PACRGQ96M98 296 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 GPR82Q96P67 336 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 TXN2Q99757 166 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 SPOCK3Q9BQ16 436 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 HSPB9Q9BQS6 159 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
SPTLC1-201ENST00000262554 VWC2LB2RUY7 222 aa10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 F8W735 103 aaPredicted RBP10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 FCGR2BP31994 310 aaPredicted RBP10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 PYY3Q5JQD4 70 aa10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 WDR73Q6P4I2 378 aa10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 UNQ5815/PRO19632Q6UWF5 114 aa10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.79
SPTLC1-201ENST00000262554 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 IGHV1-69DA0A0B4J2H0 117 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 TCL1AP56279 114 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 GRAMD2BQ96HH9 432 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 SGK494Q96LW2 274 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 AKAP6Q13023 2319 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 MED13LQ71F56 2210 aa10.14□□□□□ -0.79
SPTLC1-201ENST00000262554 IZUMO1RA6ND01 250 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 ATP6V0E1O15342 81 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 LTAP01374 205 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 IGHV3-23P01764 117 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 MT-ND6P03923 174 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 USF2Q15853 346 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 ECSCRQ19T08 205 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 LYPD1Q8N2G4 141 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 NUDT10Q8NFP7 164 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 NUDT11Q96G61 164 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 C7orf69Q9H7B7 122 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 SPINK4O60575 86 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 AMBPP02760 352 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 RNF224P0DH78 156 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 EXOC3-AS1Q8N2X6 119 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 MBD6Q96DN6 1003 aa10.13□□□□□ -0.79
SPTLC1-201ENST00000262554 IGHV3OR16-10A0A075B7F0 116 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 CA1P00915 261 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 S100A7P31151 101 aa10.12□□□□□ -0.79
SPTLC1-201ENST00000262554 SLC35B1P78383 322 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms